Hb_001021_040

Information

Type -
Description -
Location Contig1021: 19687-21001
Sequence    

Annotation

kegg
ID rcu:RCOM_1078690
description Dephospho-CoA kinase, putative (EC:2.7.1.24)
nr
ID XP_012082718.1
description PREDICTED: dephospho-CoA kinase-like [Jatropha curcas]
swissprot
ID Q94DR2
description Dephospho-CoA kinase OS=Oryza sativa subsp. japonica GN=Os01g0360600 PE=2 SV=1
trembl
ID A0A067JVY4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13897 PE=3 SV=1
Gene Ontology
ID GO:0016740
description dephospho- kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00969: 19399-40504
cDNA
(Sanger)
(ID:Location)		 032_P07.ab1: 19592-40504

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001021_040 0.0 - - PREDICTED: dephospho-CoA kinase-like [Jatropha curcas]
2 Hb_000207_050 0.0998478611 - - PREDICTED: uncharacterized protein LOC105634369 isoform X1 [Jatropha curcas]
3 Hb_000072_320 0.1000671731 - - PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Jatropha curcas]
4 Hb_000783_020 0.1102888835 - - PREDICTED: glycerol-3-phosphate dehydrogenase SDP6, mitochondrial [Jatropha curcas]
5 Hb_000096_010 0.1122399356 - - PREDICTED: U-box domain-containing protein 30-like [Citrus sinensis]
6 Hb_000165_160 0.115565213 - - PREDICTED: sorting and assembly machinery component 50 homolog [Jatropha curcas]
7 Hb_006017_010 0.1170667714 - - PREDICTED: alkylated DNA repair protein alkB homolog 8 [Jatropha curcas]
8 Hb_000985_030 0.1188240018 - - PREDICTED: RRP15-like protein [Populus euphratica]
9 Hb_000288_030 0.1190175476 - - PREDICTED: syntaxin-32 [Jatropha curcas]
10 Hb_004712_130 0.1204356488 - - PREDICTED: uncharacterized protein LOC105633074 [Jatropha curcas]
11 Hb_001318_270 0.1208650944 - - PREDICTED: pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Jatropha curcas]
12 Hb_007416_330 0.1213405943 - - PREDICTED: elongation factor 1-alpha isoform X1 [Jatropha curcas]
13 Hb_164010_030 0.1214866774 - - PREDICTED: serine/threonine-protein kinase D6PK [Jatropha curcas]
14 Hb_001489_080 0.1218459262 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
15 Hb_000538_070 0.1219591861 - - PREDICTED: coatomer subunit delta [Jatropha curcas]
16 Hb_009339_030 0.1224571691 - - PREDICTED: mitogen-activated protein kinase 9-like [Jatropha curcas]
17 Hb_002169_040 0.1229737963 - - unknown [Populus trichocarpa]
18 Hb_007416_060 0.1232544342 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 18 [Jatropha curcas]
19 Hb_000749_220 0.1232703897 - - PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Jatropha curcas]
20 Hb_001004_070 0.1259993732 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001021_040 Hb_001021_040 Hb_000207_050 Hb_000207_050 Hb_001021_040--Hb_000207_050 Hb_000072_320 Hb_000072_320 Hb_001021_040--Hb_000072_320 Hb_000783_020 Hb_000783_020 Hb_001021_040--Hb_000783_020 Hb_000096_010 Hb_000096_010 Hb_001021_040--Hb_000096_010 Hb_000165_160 Hb_000165_160 Hb_001021_040--Hb_000165_160 Hb_006017_010 Hb_006017_010 Hb_001021_040--Hb_006017_010 Hb_000207_050--Hb_000072_320 Hb_002044_150 Hb_002044_150 Hb_000207_050--Hb_002044_150 Hb_002169_050 Hb_002169_050 Hb_000207_050--Hb_002169_050 Hb_005269_070 Hb_005269_070 Hb_000207_050--Hb_005269_070 Hb_001489_080 Hb_001489_080 Hb_000207_050--Hb_001489_080 Hb_029510_050 Hb_029510_050 Hb_000207_050--Hb_029510_050 Hb_000095_080 Hb_000095_080 Hb_000072_320--Hb_000095_080 Hb_001016_120 Hb_001016_120 Hb_000072_320--Hb_001016_120 Hb_002169_040 Hb_002169_040 Hb_000072_320--Hb_002169_040 Hb_000072_320--Hb_029510_050 Hb_001314_050 Hb_001314_050 Hb_000072_320--Hb_001314_050 Hb_000985_030 Hb_000985_030 Hb_000783_020--Hb_000985_030 Hb_003053_020 Hb_003053_020 Hb_000783_020--Hb_003053_020 Hb_000783_020--Hb_001489_080 Hb_003688_150 Hb_003688_150 Hb_000783_020--Hb_003688_150 Hb_003697_040 Hb_003697_040 Hb_000783_020--Hb_003697_040 Hb_007416_060 Hb_007416_060 Hb_000783_020--Hb_007416_060 Hb_000538_070 Hb_000538_070 Hb_000096_010--Hb_000538_070 Hb_000749_220 Hb_000749_220 Hb_000096_010--Hb_000749_220 Hb_000130_050 Hb_000130_050 Hb_000096_010--Hb_000130_050 Hb_003177_030 Hb_003177_030 Hb_000096_010--Hb_003177_030 Hb_002809_050 Hb_002809_050 Hb_000096_010--Hb_002809_050 Hb_002998_060 Hb_002998_060 Hb_000096_010--Hb_002998_060 Hb_002799_070 Hb_002799_070 Hb_000165_160--Hb_002799_070 Hb_001507_040 Hb_001507_040 Hb_000165_160--Hb_001507_040 Hb_005183_120 Hb_005183_120 Hb_000165_160--Hb_005183_120 Hb_000445_040 Hb_000445_040 Hb_000165_160--Hb_000445_040 Hb_000165_160--Hb_000783_020 Hb_000334_150 Hb_000334_150 Hb_000165_160--Hb_000334_150 Hb_007416_330 Hb_007416_330 Hb_006017_010--Hb_007416_330 Hb_004117_260 Hb_004117_260 Hb_006017_010--Hb_004117_260 Hb_050622_050 Hb_050622_050 Hb_006017_010--Hb_050622_050 Hb_105105_020 Hb_105105_020 Hb_006017_010--Hb_105105_020 Hb_006915_030 Hb_006915_030 Hb_006017_010--Hb_006915_030 Hb_015934_040 Hb_015934_040 Hb_006017_010--Hb_015934_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.3056 0.619833 1.06177 1.36219 1.22884 0.89396
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.778233 1.71164 3.04659 1.7443 1.56631

CAGE analysis