Hb_001025_090

Information

Type -
Description -
Location Contig1025: 83131-88907
Sequence    

Annotation

kegg
ID rcu:RCOM_1509490
description FKBP12-interacting protein of 37 kDa, putative
nr
ID XP_012080007.1
description PREDICTED: FKBP12-interacting protein of 37 kDa [Jatropha curcas]
swissprot
ID Q9ZSZ8
description FKBP12-interacting protein of 37 kDa OS=Arabidopsis thaliana GN=FIP37 PE=1 SV=1
trembl
ID A0A067K4A6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11432 PE=4 SV=1
Gene Ontology
ID GO:0005634
description fkbp12-interacting protein of 37 kda

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01083: 83142-88861
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001025_090 0.0 - - PREDICTED: FKBP12-interacting protein of 37 kDa [Jatropha curcas]
2 Hb_004807_020 0.0549699064 - - PREDICTED: transcription initiation factor TFIID subunit 14b-like [Jatropha curcas]
3 Hb_000270_470 0.058393047 transcription factor TF Family: E2F-DP PREDICTED: pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Jatropha curcas]
4 Hb_171900_090 0.0596363191 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000176_020 0.062611026 - - PREDICTED: nuclear pore complex protein NUP43 [Jatropha curcas]
6 Hb_000789_320 0.0642007708 transcription factor TF Family: LUG PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
7 Hb_000875_080 0.0722766537 - - PREDICTED: (+)-delta-cadinene synthase isozyme XC14-like isoform X2 [Gossypium raimondii]
8 Hb_012340_090 0.07687475 - - PREDICTED: endonuclease III homolog 1, chloroplastic isoform X1 [Populus euphratica]
9 Hb_001623_270 0.0772401422 transcription factor TF Family: PHD Inhibitor of growth protein, putative [Ricinus communis]
10 Hb_000300_260 0.0802427676 - - PREDICTED: replication factor C subunit 3 [Jatropha curcas]
11 Hb_003861_060 0.0826470574 - - PREDICTED: treacle protein [Jatropha curcas]
12 Hb_002272_050 0.0831990337 - - microsomal signal peptidase 23 kD subunit, putative [Ricinus communis]
13 Hb_006615_050 0.0841531398 - - PREDICTED: uncharacterized protein LOC105640686 [Jatropha curcas]
14 Hb_002343_040 0.0857418908 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic isoform X1 [Jatropha curcas]
15 Hb_008225_090 0.0870837778 - - PREDICTED: serine/threonine-protein kinase AFC2 isoform X2 [Jatropha curcas]
16 Hb_146255_020 0.0877016929 - - PREDICTED: chromatin structure-remodeling complex protein BSH [Jatropha curcas]
17 Hb_000297_160 0.0884730424 - - PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]
18 Hb_001863_380 0.0889903731 - - PREDICTED: 14-3-3 protein 7 [Jatropha curcas]
19 Hb_000270_310 0.0905985762 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like [Populus euphratica]
20 Hb_000270_680 0.0924465366 - - hypothetical protein POPTR_0015s08420g [Populus trichocarpa]

Gene co-expression network

sample Hb_001025_090 Hb_001025_090 Hb_004807_020 Hb_004807_020 Hb_001025_090--Hb_004807_020 Hb_000270_470 Hb_000270_470 Hb_001025_090--Hb_000270_470 Hb_171900_090 Hb_171900_090 Hb_001025_090--Hb_171900_090 Hb_000176_020 Hb_000176_020 Hb_001025_090--Hb_000176_020 Hb_000789_320 Hb_000789_320 Hb_001025_090--Hb_000789_320 Hb_000875_080 Hb_000875_080 Hb_001025_090--Hb_000875_080 Hb_006615_050 Hb_006615_050 Hb_004807_020--Hb_006615_050 Hb_001025_120 Hb_001025_120 Hb_004807_020--Hb_001025_120 Hb_004807_020--Hb_171900_090 Hb_146255_020 Hb_146255_020 Hb_004807_020--Hb_146255_020 Hb_018790_020 Hb_018790_020 Hb_004807_020--Hb_018790_020 Hb_008225_090 Hb_008225_090 Hb_000270_470--Hb_008225_090 Hb_000270_470--Hb_000789_320 Hb_111036_010 Hb_111036_010 Hb_000270_470--Hb_111036_010 Hb_000270_470--Hb_171900_090 Hb_000270_470--Hb_000176_020 Hb_171900_090--Hb_000789_320 Hb_164390_010 Hb_164390_010 Hb_171900_090--Hb_164390_010 Hb_183433_010 Hb_183433_010 Hb_171900_090--Hb_183433_010 Hb_002272_050 Hb_002272_050 Hb_171900_090--Hb_002272_050 Hb_171900_090--Hb_000176_020 Hb_001623_270 Hb_001623_270 Hb_000176_020--Hb_001623_270 Hb_000230_460 Hb_000230_460 Hb_000176_020--Hb_000230_460 Hb_000699_150 Hb_000699_150 Hb_000176_020--Hb_000699_150 Hb_000176_020--Hb_000789_320 Hb_000339_040 Hb_000339_040 Hb_000789_320--Hb_000339_040 Hb_000789_320--Hb_001623_270 Hb_000866_310 Hb_000866_310 Hb_000789_320--Hb_000866_310 Hb_001153_210 Hb_001153_210 Hb_000789_320--Hb_001153_210 Hb_000336_210 Hb_000336_210 Hb_000875_080--Hb_000336_210 Hb_000875_080--Hb_002272_050 Hb_000049_140 Hb_000049_140 Hb_000875_080--Hb_000049_140 Hb_000297_160 Hb_000297_160 Hb_000875_080--Hb_000297_160 Hb_005271_040 Hb_005271_040 Hb_000875_080--Hb_005271_040 Hb_000875_080--Hb_171900_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.87676 7.61096 18.5184 9.51949 6.43538 6.20762
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.81978 13.0436 5.26927 9.80636 7.99709

CAGE analysis