Hb_001031_080

Information

Type -
Description -
Location Contig1031: 94715-100014
Sequence    

Annotation

kegg
ID rcu:RCOM_0610400
description hypothetical protein
nr
ID XP_012089385.1
description PREDICTED: uncharacterized protein LOC105647773 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JIS0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23580 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01264: 94877-99751 , PASA_asmbl_01266: 96278-96691
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001031_080 0.0 - - PREDICTED: uncharacterized protein LOC105647773 isoform X1 [Jatropha curcas]
2 Hb_001053_180 0.1003749044 - - protein binding protein, putative [Ricinus communis]
3 Hb_116349_100 0.1353975948 rubber biosynthesis Gene Name: Phosphomevalonate kinase phosphomevalonate kinase [Hevea brasiliensis]
4 Hb_000096_090 0.1371114395 - - hypothetical protein JCGZ_12551 [Jatropha curcas]
5 Hb_005305_090 0.1387546875 - - PREDICTED: uncharacterized protein LOC105112272 [Populus euphratica]
6 Hb_007479_050 0.1395321156 - - PREDICTED: uncharacterized protein LOC105649412 [Jatropha curcas]
7 Hb_001396_180 0.1416692676 - - PREDICTED: uncharacterized protein LOC105644834 [Jatropha curcas]
8 Hb_000735_130 0.1433905364 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004317_040 0.1437967052 - - hypothetical protein POPTR_0006s22010g [Populus trichocarpa]
10 Hb_002749_100 0.1446655538 - - PREDICTED: ubiquitin domain-containing protein 1 [Jatropha curcas]
11 Hb_000120_760 0.1474920353 transcription factor TF Family: HMG PREDICTED: HMG1/2-like protein [Populus euphratica]
12 Hb_000331_440 0.1482738697 - - hypothetical protein POPTR_0015s10290g [Populus trichocarpa]
13 Hb_011316_100 0.1494274071 - - PREDICTED: glycosyltransferase family 64 protein C4-like [Jatropha curcas]
14 Hb_000505_010 0.1501880299 - - PREDICTED: uncharacterized protein LOC105641242 [Jatropha curcas]
15 Hb_001699_040 0.1543099446 - - PREDICTED: uncharacterized protein LOC105636529 isoform X2 [Jatropha curcas]
16 Hb_024682_010 0.1549636165 - - sterol isomerase, putative [Ricinus communis]
17 Hb_000302_220 0.1554541764 - - PREDICTED: origin of replication complex subunit 5 isoform X1 [Jatropha curcas]
18 Hb_025469_050 0.1565007965 - - PREDICTED: DCN1-like protein 4 isoform X1 [Jatropha curcas]
19 Hb_001141_380 0.1573465152 - - hypothetical protein PRUPE_ppa012823mg [Prunus persica]
20 Hb_101705_030 0.1580196377 - - hypothetical protein CICLE_v10032980mg [Citrus clementina]

Gene co-expression network

sample Hb_001031_080 Hb_001031_080 Hb_001053_180 Hb_001053_180 Hb_001031_080--Hb_001053_180 Hb_116349_100 Hb_116349_100 Hb_001031_080--Hb_116349_100 Hb_000096_090 Hb_000096_090 Hb_001031_080--Hb_000096_090 Hb_005305_090 Hb_005305_090 Hb_001031_080--Hb_005305_090 Hb_007479_050 Hb_007479_050 Hb_001031_080--Hb_007479_050 Hb_001396_180 Hb_001396_180 Hb_001031_080--Hb_001396_180 Hb_024682_010 Hb_024682_010 Hb_001053_180--Hb_024682_010 Hb_001053_180--Hb_000096_090 Hb_000127_010 Hb_000127_010 Hb_001053_180--Hb_000127_010 Hb_000345_390 Hb_000345_390 Hb_001053_180--Hb_000345_390 Hb_001053_180--Hb_116349_100 Hb_116349_100--Hb_000345_390 Hb_003020_020 Hb_003020_020 Hb_116349_100--Hb_003020_020 Hb_000505_010 Hb_000505_010 Hb_116349_100--Hb_000505_010 Hb_001959_070 Hb_001959_070 Hb_116349_100--Hb_001959_070 Hb_116349_100--Hb_000096_090 Hb_003376_040 Hb_003376_040 Hb_000096_090--Hb_003376_040 Hb_000096_090--Hb_001396_180 Hb_000648_110 Hb_000648_110 Hb_000096_090--Hb_000648_110 Hb_000316_050 Hb_000316_050 Hb_000096_090--Hb_000316_050 Hb_003732_020 Hb_003732_020 Hb_000096_090--Hb_003732_020 Hb_001538_090 Hb_001538_090 Hb_005305_090--Hb_001538_090 Hb_003536_110 Hb_003536_110 Hb_005305_090--Hb_003536_110 Hb_134949_020 Hb_134949_020 Hb_005305_090--Hb_134949_020 Hb_000948_190 Hb_000948_190 Hb_005305_090--Hb_000948_190 Hb_000363_320 Hb_000363_320 Hb_005305_090--Hb_000363_320 Hb_011316_100 Hb_011316_100 Hb_007479_050--Hb_011316_100 Hb_004705_040 Hb_004705_040 Hb_007479_050--Hb_004705_040 Hb_000554_010 Hb_000554_010 Hb_007479_050--Hb_000554_010 Hb_000307_140 Hb_000307_140 Hb_007479_050--Hb_000307_140 Hb_002518_030 Hb_002518_030 Hb_007479_050--Hb_002518_030 Hb_000170_200 Hb_000170_200 Hb_007479_050--Hb_000170_200 Hb_001360_040 Hb_001360_040 Hb_001396_180--Hb_001360_040 Hb_001396_180--Hb_003376_040 Hb_005539_350 Hb_005539_350 Hb_001396_180--Hb_005539_350 Hb_001269_680 Hb_001269_680 Hb_001396_180--Hb_001269_680 Hb_153112_020 Hb_153112_020 Hb_001396_180--Hb_153112_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.559 0.319227 11.0403 10.7632 10.2204 18.0049
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.21 19.0689 19.5348 1.47185 6.09681

CAGE analysis