Hb_001047_170

Information

Type -
Description -
Location Contig1047: 100704-102080
Sequence    

Annotation

kegg
ID rcu:RCOM_0557310
description hypothetical protein
nr
ID XP_012092223.1
description PREDICTED: uncharacterized protein LOC105649981 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JCB1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21918 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001047_170 0.0 - - PREDICTED: uncharacterized protein LOC105649981 [Jatropha curcas]
2 Hb_002301_110 0.125814055 - - PREDICTED: protein E6-like [Populus euphratica]
3 Hb_003562_030 0.1449593231 - - -
4 Hb_001568_010 0.148367339 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002025_380 0.1521590443 - - Uncharacterized protein TCM_011176 [Theobroma cacao]
6 Hb_019026_050 0.1568839281 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001040_200 0.1632551646 - - PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Jatropha curcas]
8 Hb_008727_040 0.1650767743 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004282_010 0.165848059 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
10 Hb_006501_100 0.1687457507 - - malic enzyme, putative [Ricinus communis]
11 Hb_000014_080 0.1731972544 - - PREDICTED: UDP-glycosyltransferase 87A1-like [Jatropha curcas]
12 Hb_000318_060 0.1743276348 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000676_170 0.1744242547 - - PREDICTED: bifunctional epoxide hydrolase 2 [Jatropha curcas]
14 Hb_006846_030 0.1751355809 - - respiratory burst oxidase A [Manihot esculenta]
15 Hb_012787_050 0.1752864267 - - PREDICTED: glutathione S-transferase U18-like [Jatropha curcas]
16 Hb_003847_050 0.1753453565 - - PREDICTED: aquaporin SIP1-1 [Jatropha curcas]
17 Hb_023956_010 0.1768113287 - - glutathione s-transferase, putative [Ricinus communis]
18 Hb_007138_030 0.1768441135 - - PREDICTED: putative disease resistance protein At4g11170 [Jatropha curcas]
19 Hb_000749_160 0.1770183568 - - calmodulin binding protein, putative [Ricinus communis]
20 Hb_003964_060 0.1779363349 - - PREDICTED: beta-glucosidase 40 [Jatropha curcas]

Gene co-expression network

sample Hb_001047_170 Hb_001047_170 Hb_002301_110 Hb_002301_110 Hb_001047_170--Hb_002301_110 Hb_003562_030 Hb_003562_030 Hb_001047_170--Hb_003562_030 Hb_001568_010 Hb_001568_010 Hb_001047_170--Hb_001568_010 Hb_002025_380 Hb_002025_380 Hb_001047_170--Hb_002025_380 Hb_019026_050 Hb_019026_050 Hb_001047_170--Hb_019026_050 Hb_001040_200 Hb_001040_200 Hb_001047_170--Hb_001040_200 Hb_001472_110 Hb_001472_110 Hb_002301_110--Hb_001472_110 Hb_164926_040 Hb_164926_040 Hb_002301_110--Hb_164926_040 Hb_002072_040 Hb_002072_040 Hb_002301_110--Hb_002072_040 Hb_000165_200 Hb_000165_200 Hb_002301_110--Hb_000165_200 Hb_002339_030 Hb_002339_030 Hb_002301_110--Hb_002339_030 Hb_000834_040 Hb_000834_040 Hb_003562_030--Hb_000834_040 Hb_003562_030--Hb_001040_200 Hb_188281_050 Hb_188281_050 Hb_003562_030--Hb_188281_050 Hb_000112_050 Hb_000112_050 Hb_003562_030--Hb_000112_050 Hb_003640_010 Hb_003640_010 Hb_003562_030--Hb_003640_010 Hb_006846_030 Hb_006846_030 Hb_001568_010--Hb_006846_030 Hb_003847_050 Hb_003847_050 Hb_001568_010--Hb_003847_050 Hb_004282_010 Hb_004282_010 Hb_001568_010--Hb_004282_010 Hb_008727_040 Hb_008727_040 Hb_001568_010--Hb_008727_040 Hb_012787_050 Hb_012787_050 Hb_001568_010--Hb_012787_050 Hb_000014_080 Hb_000014_080 Hb_001568_010--Hb_000014_080 Hb_006277_030 Hb_006277_030 Hb_002025_380--Hb_006277_030 Hb_003189_010 Hb_003189_010 Hb_002025_380--Hb_003189_010 Hb_002818_170 Hb_002818_170 Hb_002025_380--Hb_002818_170 Hb_002097_180 Hb_002097_180 Hb_002025_380--Hb_002097_180 Hb_005144_080 Hb_005144_080 Hb_002025_380--Hb_005144_080 Hb_006501_100 Hb_006501_100 Hb_002025_380--Hb_006501_100 Hb_019026_050--Hb_003847_050 Hb_023956_010 Hb_023956_010 Hb_019026_050--Hb_023956_010 Hb_019026_050--Hb_006846_030 Hb_002553_070 Hb_002553_070 Hb_019026_050--Hb_002553_070 Hb_000120_320 Hb_000120_320 Hb_019026_050--Hb_000120_320 Hb_007632_130 Hb_007632_130 Hb_019026_050--Hb_007632_130 Hb_000594_160 Hb_000594_160 Hb_001040_200--Hb_000594_160 Hb_022250_160 Hb_022250_160 Hb_001040_200--Hb_022250_160 Hb_007386_030 Hb_007386_030 Hb_001040_200--Hb_007386_030 Hb_001040_200--Hb_004282_010 Hb_004079_100 Hb_004079_100 Hb_001040_200--Hb_004079_100 Hb_002448_020 Hb_002448_020 Hb_001040_200--Hb_002448_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.205605 0.354551 1.10494 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.133439 1.11969 0.295408

CAGE analysis