Hb_001051_070

Information

Type -
Description -
Location Contig1051: 101639-109455
Sequence    

Annotation

kegg
ID rcu:RCOM_0034480
description hypothetical protein
nr
ID XP_012064804.1
description PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
swissprot
ID Q8VZF6
description Protein ENHANCED DISEASE RESISTANCE 2-like OS=Arabidopsis thaliana GN=EDR2L PE=2 SV=1
trembl
ID A0A067L9W7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05505 PE=4 SV=1
Gene Ontology
ID GO:0005886
description protein enhanced disease resistance 2-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001051_070 0.0 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
2 Hb_000477_100 0.0725351675 - - PREDICTED: GDP-mannose transporter GONST4 [Jatropha curcas]
3 Hb_007286_020 0.0731484873 - - hypothetical protein L484_010675 [Morus notabilis]
4 Hb_000023_300 0.079294906 - - Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
5 Hb_011214_160 0.079644704 - - PREDICTED: coatomer subunit delta [Jatropha curcas]
6 Hb_003998_040 0.0853213567 - - organic anion transporter, putative [Ricinus communis]
7 Hb_000679_100 0.0861731135 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g25400 isoform X1 [Jatropha curcas]
8 Hb_003097_140 0.0872734013 - - PREDICTED: glycosyltransferase-like KOBITO 1 [Jatropha curcas]
9 Hb_001454_230 0.0905577656 - - PREDICTED: kinesin-13A isoform X1 [Jatropha curcas]
10 Hb_001097_040 0.0924990162 - - PREDICTED: probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B [Jatropha curcas]
11 Hb_000146_040 0.0935470146 - - PREDICTED: reticulon-like protein B11 [Jatropha curcas]
12 Hb_000352_300 0.0938300299 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Jatropha curcas]
13 Hb_003038_040 0.0944961822 transcription factor TF Family: TUB phosphoric diester hydrolase, putative [Ricinus communis]
14 Hb_000371_090 0.0945695893 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like [Jatropha curcas]
15 Hb_003994_220 0.0962004328 - - PREDICTED: V-type proton ATPase catalytic subunit A [Jatropha curcas]
16 Hb_007409_040 0.0962760553 - - actin family protein [Populus trichocarpa]
17 Hb_001021_010 0.0966724247 - - PREDICTED: bifunctional protein FolD 2 [Jatropha curcas]
18 Hb_135757_010 0.0990857227 - - PREDICTED: subtilisin-like protease SBT1.6 [Jatropha curcas]
19 Hb_000140_350 0.099797389 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000984_310 0.1001128637 - - Hydrolase, hydrolyzing O-glycosyl compounds, putative [Theobroma cacao]

Gene co-expression network

sample Hb_001051_070 Hb_001051_070 Hb_000477_100 Hb_000477_100 Hb_001051_070--Hb_000477_100 Hb_007286_020 Hb_007286_020 Hb_001051_070--Hb_007286_020 Hb_000023_300 Hb_000023_300 Hb_001051_070--Hb_000023_300 Hb_011214_160 Hb_011214_160 Hb_001051_070--Hb_011214_160 Hb_003998_040 Hb_003998_040 Hb_001051_070--Hb_003998_040 Hb_000679_100 Hb_000679_100 Hb_001051_070--Hb_000679_100 Hb_007481_010 Hb_007481_010 Hb_000477_100--Hb_007481_010 Hb_000046_500 Hb_000046_500 Hb_000477_100--Hb_000046_500 Hb_000352_300 Hb_000352_300 Hb_000477_100--Hb_000352_300 Hb_000146_040 Hb_000146_040 Hb_000477_100--Hb_000146_040 Hb_003097_140 Hb_003097_140 Hb_000477_100--Hb_003097_140 Hb_004102_170 Hb_004102_170 Hb_007286_020--Hb_004102_170 Hb_086639_080 Hb_086639_080 Hb_007286_020--Hb_086639_080 Hb_010042_030 Hb_010042_030 Hb_007286_020--Hb_010042_030 Hb_007286_020--Hb_000679_100 Hb_002486_050 Hb_002486_050 Hb_007286_020--Hb_002486_050 Hb_012262_030 Hb_012262_030 Hb_000023_300--Hb_012262_030 Hb_000227_160 Hb_000227_160 Hb_000023_300--Hb_000227_160 Hb_001097_040 Hb_001097_040 Hb_000023_300--Hb_001097_040 Hb_010672_020 Hb_010672_020 Hb_000023_300--Hb_010672_020 Hb_008748_030 Hb_008748_030 Hb_000023_300--Hb_008748_030 Hb_011214_160--Hb_003998_040 Hb_001703_050 Hb_001703_050 Hb_011214_160--Hb_001703_050 Hb_000371_090 Hb_000371_090 Hb_011214_160--Hb_000371_090 Hb_000197_020 Hb_000197_020 Hb_011214_160--Hb_000197_020 Hb_000139_530 Hb_000139_530 Hb_011214_160--Hb_000139_530 Hb_000066_030 Hb_000066_030 Hb_003998_040--Hb_000066_030 Hb_005218_020 Hb_005218_020 Hb_003998_040--Hb_005218_020 Hb_007765_040 Hb_007765_040 Hb_003998_040--Hb_007765_040 Hb_001633_080 Hb_001633_080 Hb_003998_040--Hb_001633_080 Hb_003998_040--Hb_000371_090 Hb_000085_260 Hb_000085_260 Hb_000679_100--Hb_000085_260 Hb_000679_100--Hb_001097_040 Hb_000679_100--Hb_000023_300 Hb_000679_100--Hb_010042_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.72091 2.28421 2.75658 7.13551 2.10735 1.99648
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.51994 1.49861 2.69022 3.46275 2.14244

CAGE analysis