Hb_001055_040

Information

Type -
Description -
Location Contig1055: 99285-102085
Sequence    

Annotation

kegg
ID vvi:100232956
description (-)-a-terpineol synthase (EC:4.2.3.111)
nr
ID XP_012075360.1
description PREDICTED: terpene synthase 10-like [Jatropha curcas]
swissprot
ID Q6PWU2
description (-)-alpha-terpineol synthase OS=Vitis vinifera PE=1 SV=1
trembl
ID A0A067KK14
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09482 PE=4 SV=1
Gene Ontology
ID GO:0010334
description terpene synthase 10-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001055_040 0.0 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
2 Hb_003687_180 0.214572038 - - hypothetical protein JCGZ_02335 [Jatropha curcas]
3 Hb_032533_010 0.2158664958 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
4 Hb_001902_020 0.3007161553 - - -
5 Hb_000926_220 0.3035081683 - - -
6 Hb_017836_010 0.3039646654 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
7 Hb_000721_020 0.3056049133 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
8 Hb_010232_010 0.3100587686 - - -
9 Hb_006045_060 0.3127169095 - - PREDICTED: uncharacterized protein LOC104222982, partial [Nicotiana sylvestris]
10 Hb_003607_030 0.3147456753 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor ABI3 [Jatropha curcas]
11 Hb_095413_040 0.3151025019 - - -
12 Hb_009693_040 0.3175590602 - - PREDICTED: serine/threonine-protein kinase At3g07070 [Brassica rapa]
13 Hb_007963_050 0.3194825187 - - -
14 Hb_001934_020 0.321379709 - - PREDICTED: uncharacterized protein LOC105178413 [Sesamum indicum]
15 Hb_049438_010 0.3417317769 - - -
16 Hb_000953_150 0.3437822916 - - -
17 Hb_009742_010 0.3452345821 - - -
18 Hb_000098_280 0.3467543065 - - PREDICTED: pentatricopeptide repeat-containing protein At1g33350 [Jatropha curcas]
19 Hb_080765_020 0.3533808371 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
20 Hb_046727_010 0.3549164364 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]

Gene co-expression network

sample Hb_001055_040 Hb_001055_040 Hb_003687_180 Hb_003687_180 Hb_001055_040--Hb_003687_180 Hb_032533_010 Hb_032533_010 Hb_001055_040--Hb_032533_010 Hb_001902_020 Hb_001902_020 Hb_001055_040--Hb_001902_020 Hb_000926_220 Hb_000926_220 Hb_001055_040--Hb_000926_220 Hb_017836_010 Hb_017836_010 Hb_001055_040--Hb_017836_010 Hb_000721_020 Hb_000721_020 Hb_001055_040--Hb_000721_020 Hb_003687_180--Hb_032533_010 Hb_003687_180--Hb_000721_020 Hb_006045_060 Hb_006045_060 Hb_003687_180--Hb_006045_060 Hb_000326_020 Hb_000326_020 Hb_003687_180--Hb_000326_020 Hb_010232_010 Hb_010232_010 Hb_003687_180--Hb_010232_010 Hb_032533_010--Hb_000721_020 Hb_032533_010--Hb_006045_060 Hb_032533_010--Hb_000326_020 Hb_032533_010--Hb_010232_010 Hb_001903_080 Hb_001903_080 Hb_001902_020--Hb_001903_080 Hb_011639_070 Hb_011639_070 Hb_001902_020--Hb_011639_070 Hb_143397_010 Hb_143397_010 Hb_001902_020--Hb_143397_010 Hb_002498_200 Hb_002498_200 Hb_001902_020--Hb_002498_200 Hb_008707_030 Hb_008707_030 Hb_001902_020--Hb_008707_030 Hb_000926_220--Hb_017836_010 Hb_095413_040 Hb_095413_040 Hb_000926_220--Hb_095413_040 Hb_003607_030 Hb_003607_030 Hb_000926_220--Hb_003607_030 Hb_009693_040 Hb_009693_040 Hb_000926_220--Hb_009693_040 Hb_007963_050 Hb_007963_050 Hb_000926_220--Hb_007963_050 Hb_049438_010 Hb_049438_010 Hb_000926_220--Hb_049438_010 Hb_017836_010--Hb_095413_040 Hb_017836_010--Hb_003607_030 Hb_017836_010--Hb_009693_040 Hb_017836_010--Hb_007963_050 Hb_017836_010--Hb_049438_010 Hb_000721_020--Hb_006045_060 Hb_000721_020--Hb_000326_020 Hb_074152_010 Hb_074152_010 Hb_000721_020--Hb_074152_010 Hb_000917_250 Hb_000917_250 Hb_000721_020--Hb_000917_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0861282 0 0 0 0.023977 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0229326 0 0 0

CAGE analysis