Hb_001059_170

Information

Type -
Description -
Location Contig1059: 181694-184263
Sequence    

Annotation

kegg
ID rcu:RCOM_1096030
description sugar transporter, putative (EC:1.3.1.74)
nr
ID CAN87006.1
description hexose transporter 1 [Hevea brasiliensis]
swissprot
ID Q41144
description Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1
trembl
ID B7FCC1
description Hexose transporter 1 OS=Hevea brasiliensis GN=hxt1 PE=2 SV=1
Gene Ontology
ID GO:0016021
description sugar carrier protein c

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001059_170 0.0 - - hexose transporter 1 [Hevea brasiliensis]
2 Hb_001059_160 0.1589161478 - - hexose transporter 1 [Hevea brasiliensis]
3 Hb_002260_030 0.1822889718 - - PREDICTED: putative glutamine amidotransferase YLR126C [Jatropha curcas]
4 Hb_001357_120 0.1841733238 - - ubiquitin-activating enzyme E1, putative [Ricinus communis]
5 Hb_002918_050 0.1898775179 transcription factor TF Family: SBP PREDICTED: mitochondrial arginine transporter BAC1-like isoform X1 [Jatropha curcas]
6 Hb_000679_220 0.1953939595 - - PREDICTED: uncharacterized protein LOC105637638 [Jatropha curcas]
7 Hb_001059_150 0.1964732134 - - PREDICTED: importin subunit alpha-5 [Jatropha curcas]
8 Hb_000258_330 0.1981410847 - - Ran GTPase binding protein, putative [Ricinus communis]
9 Hb_004346_030 0.2000284612 - - sucrose phosphate phosphatase, putative [Ricinus communis]
10 Hb_084886_010 0.2050367193 - - conserved hypothetical protein [Ricinus communis]
11 Hb_006153_080 0.2061842132 - - flavin-containing monooxygenase-related family protein [Populus trichocarpa]
12 Hb_000340_310 0.209076636 - - PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Jatropha curcas]
13 Hb_000096_150 0.210065354 - - NADH-ubiquinone oxidoreductase 18 kDa subunit, mitochondrial precursor, putative [Ricinus communis]
14 Hb_001153_120 0.2105600893 - - PREDICTED: bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Jatropha curcas]
15 Hb_004679_050 0.2112562885 - - galactono-1,4-lactone dehydrogenase, putative [Ricinus communis]
16 Hb_000125_210 0.211965967 - - PREDICTED: electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial [Jatropha curcas]
17 Hb_005098_030 0.2136422382 - - PREDICTED: argininosuccinate synthase, chloroplastic [Jatropha curcas]
18 Hb_004225_080 0.2139827478 - - -
19 Hb_011671_460 0.2151961677 - - PREDICTED: ankyrin repeat-containing protein At3g12360 [Jatropha curcas]
20 Hb_001433_130 0.2159811301 - - PREDICTED: uncharacterized protein LOC105647468 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001059_170 Hb_001059_170 Hb_001059_160 Hb_001059_160 Hb_001059_170--Hb_001059_160 Hb_002260_030 Hb_002260_030 Hb_001059_170--Hb_002260_030 Hb_001357_120 Hb_001357_120 Hb_001059_170--Hb_001357_120 Hb_002918_050 Hb_002918_050 Hb_001059_170--Hb_002918_050 Hb_000679_220 Hb_000679_220 Hb_001059_170--Hb_000679_220 Hb_001059_150 Hb_001059_150 Hb_001059_170--Hb_001059_150 Hb_000796_010 Hb_000796_010 Hb_001059_160--Hb_000796_010 Hb_002234_060 Hb_002234_060 Hb_001059_160--Hb_002234_060 Hb_000258_330 Hb_000258_330 Hb_001059_160--Hb_000258_330 Hb_000331_460 Hb_000331_460 Hb_001059_160--Hb_000331_460 Hb_004225_080 Hb_004225_080 Hb_001059_160--Hb_004225_080 Hb_002260_030--Hb_001357_120 Hb_002774_050 Hb_002774_050 Hb_002260_030--Hb_002774_050 Hb_000914_170 Hb_000914_170 Hb_002260_030--Hb_000914_170 Hb_008948_100 Hb_008948_100 Hb_002260_030--Hb_008948_100 Hb_000175_030 Hb_000175_030 Hb_002260_030--Hb_000175_030 Hb_000705_290 Hb_000705_290 Hb_002260_030--Hb_000705_290 Hb_001519_030 Hb_001519_030 Hb_001357_120--Hb_001519_030 Hb_000836_130 Hb_000836_130 Hb_001357_120--Hb_000836_130 Hb_000424_210 Hb_000424_210 Hb_001357_120--Hb_000424_210 Hb_000196_080 Hb_000196_080 Hb_001357_120--Hb_000196_080 Hb_001218_040 Hb_001218_040 Hb_001357_120--Hb_001218_040 Hb_000052_020 Hb_000052_020 Hb_002918_050--Hb_000052_020 Hb_000997_360 Hb_000997_360 Hb_002918_050--Hb_000997_360 Hb_003734_110 Hb_003734_110 Hb_002918_050--Hb_003734_110 Hb_000125_210 Hb_000125_210 Hb_002918_050--Hb_000125_210 Hb_007747_210 Hb_007747_210 Hb_002918_050--Hb_007747_210 Hb_042202_030 Hb_042202_030 Hb_002918_050--Hb_042202_030 Hb_094900_010 Hb_094900_010 Hb_000679_220--Hb_094900_010 Hb_000389_050 Hb_000389_050 Hb_000679_220--Hb_000389_050 Hb_002936_080 Hb_002936_080 Hb_000679_220--Hb_002936_080 Hb_005344_030 Hb_005344_030 Hb_000679_220--Hb_005344_030 Hb_004672_030 Hb_004672_030 Hb_000679_220--Hb_004672_030 Hb_001153_120 Hb_001153_120 Hb_001059_150--Hb_001153_120 Hb_011671_460 Hb_011671_460 Hb_001059_150--Hb_011671_460 Hb_000934_190 Hb_000934_190 Hb_001059_150--Hb_000934_190 Hb_002045_060 Hb_002045_060 Hb_001059_150--Hb_002045_060 Hb_000377_150 Hb_000377_150 Hb_001059_150--Hb_000377_150 Hb_000419_070 Hb_000419_070 Hb_001059_150--Hb_000419_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.32349 0.970841 16.529 12.7137 1.10735 2.39503
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
46.1972 17.3556 54.2302 13.842 24.7941

CAGE analysis