Hb_001080_040

Information

Type -
Description -
Location Contig1080: 8584-11514
Sequence    

Annotation

kegg
ID rcu:RCOM_1600950
description cytochrome P450, putative (EC:1.14.13.76)
nr
ID XP_002510669.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q7XU38
description Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3
trembl
ID B9R8M6
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1600950 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 87a3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001080_040 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_049562_010 0.0512748767 - - hypothetical protein JCGZ_25442 [Jatropha curcas]
3 Hb_039814_010 0.0662386247 - - hypothetical protein JCGZ_05023 [Jatropha curcas]
4 Hb_154646_010 0.0688892017 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
5 Hb_001817_070 0.0690151635 - - nucleic acid binding protein, putative [Ricinus communis]
6 Hb_000135_040 0.0699202022 - - PREDICTED: putative F-box/FBD/LRR-repeat protein At5g56810 [Jatropha curcas]
7 Hb_008953_020 0.0699535088 - - hypothetical protein EUGRSUZ_C03826 [Eucalyptus grandis]
8 Hb_000238_010 0.070673339 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_008221_010 0.0709783018 - - hypothetical protein JCGZ_10961 [Jatropha curcas]
10 Hb_002154_090 0.0711381723 - - -
11 Hb_013654_020 0.071941667 - - putative prolin-rich extensin-like receptor protein kinase family protein [Zea mays]
12 Hb_048653_010 0.0719828105 - - PREDICTED: mavicyanin [Jatropha curcas]
13 Hb_042239_010 0.0723591165 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
14 Hb_000370_050 0.0737797556 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
15 Hb_003702_020 0.0737924729 - - PREDICTED: phospholipase A1-IIgamma-like [Jatropha curcas]
16 Hb_008092_010 0.0739525811 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
17 Hb_007592_010 0.0747590102 - - PREDICTED: uncharacterized protein LOC105118874 [Populus euphratica]
18 Hb_005426_010 0.0748189573 - - polyprotein [Oryza australiensis]
19 Hb_005649_120 0.0755591517 - - Anthocyanin 5-aromatic acyltransferase, putative [Ricinus communis]
20 Hb_002342_040 0.0794396036 - - FERONIA, partial [Arabis alpina]

Gene co-expression network

sample Hb_001080_040 Hb_001080_040 Hb_049562_010 Hb_049562_010 Hb_001080_040--Hb_049562_010 Hb_039814_010 Hb_039814_010 Hb_001080_040--Hb_039814_010 Hb_154646_010 Hb_154646_010 Hb_001080_040--Hb_154646_010 Hb_001817_070 Hb_001817_070 Hb_001080_040--Hb_001817_070 Hb_000135_040 Hb_000135_040 Hb_001080_040--Hb_000135_040 Hb_008953_020 Hb_008953_020 Hb_001080_040--Hb_008953_020 Hb_005649_120 Hb_005649_120 Hb_049562_010--Hb_005649_120 Hb_175426_010 Hb_175426_010 Hb_049562_010--Hb_175426_010 Hb_002154_090 Hb_002154_090 Hb_049562_010--Hb_002154_090 Hb_000238_010 Hb_000238_010 Hb_049562_010--Hb_000238_010 Hb_007627_020 Hb_007627_020 Hb_049562_010--Hb_007627_020 Hb_122911_010 Hb_122911_010 Hb_039814_010--Hb_122911_010 Hb_002342_040 Hb_002342_040 Hb_039814_010--Hb_002342_040 Hb_000045_270 Hb_000045_270 Hb_039814_010--Hb_000045_270 Hb_010452_030 Hb_010452_030 Hb_039814_010--Hb_010452_030 Hb_001100_020 Hb_001100_020 Hb_039814_010--Hb_001100_020 Hb_005426_010 Hb_005426_010 Hb_039814_010--Hb_005426_010 Hb_154646_010--Hb_001817_070 Hb_154646_010--Hb_000135_040 Hb_154646_010--Hb_008953_020 Hb_008221_010 Hb_008221_010 Hb_154646_010--Hb_008221_010 Hb_154646_010--Hb_000238_010 Hb_013654_020 Hb_013654_020 Hb_154646_010--Hb_013654_020 Hb_001817_070--Hb_000135_040 Hb_001817_070--Hb_008953_020 Hb_001817_070--Hb_008221_010 Hb_001817_070--Hb_013654_020 Hb_048653_010 Hb_048653_010 Hb_001817_070--Hb_048653_010 Hb_000135_040--Hb_008953_020 Hb_000135_040--Hb_008221_010 Hb_000135_040--Hb_013654_020 Hb_000135_040--Hb_048653_010 Hb_042239_010 Hb_042239_010 Hb_000135_040--Hb_042239_010 Hb_008953_020--Hb_008221_010 Hb_008953_020--Hb_013654_020 Hb_008953_020--Hb_048653_010 Hb_008953_020--Hb_042239_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 6.27432 0.00954811 0.0802797 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.13719 0

CAGE analysis