Hb_001097_100

Information

Type -
Description -
Location Contig1097: 86513-89963
Sequence    

Annotation

kegg
ID tcc:TCM_030157
description Chaperone DnaJ-domain superfamily protein
nr
ID XP_007025982.1
description Chaperone DnaJ-domain superfamily protein [Theobroma cacao]
swissprot
ID Q8GUN6
description Chaperone protein dnaJ 50 OS=Arabidopsis thaliana GN=C50 PE=2 SV=1
trembl
ID A0A061GNC4
description Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao GN=TCM_030157 PE=4 SV=1
Gene Ontology
ID GO:0005783
description dnaj homolog subfamily c member 25 homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001097_100 0.0 - - Chaperone DnaJ-domain superfamily protein [Theobroma cacao]
2 Hb_114336_030 0.1147179073 - - PREDICTED: uncharacterized protein LOC105642104 [Jatropha curcas]
3 Hb_001699_210 0.1182318641 - - PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1 [Jatropha curcas]
4 Hb_001114_160 0.1268607394 - - PREDICTED: beta carbonic anhydrase 5, chloroplastic [Jatropha curcas]
5 Hb_032202_180 0.1326773755 - - PREDICTED: protein-ribulosamine 3-kinase, chloroplastic [Jatropha curcas]
6 Hb_000228_090 0.1331328204 - - PREDICTED: protein PAM68, chloroplastic [Jatropha curcas]
7 Hb_012340_090 0.1348766912 - - PREDICTED: endonuclease III homolog 1, chloroplastic isoform X1 [Populus euphratica]
8 Hb_002471_250 0.1354246698 - - Tapt1/CMV receptor, putative isoform 2 [Theobroma cacao]
9 Hb_002820_050 0.1397729592 - - PREDICTED: putative glutathione-specific gamma-glutamylcyclotransferase 2 [Jatropha curcas]
10 Hb_003848_040 0.1407129794 - - PREDICTED: phosphatidylinositol-glycan biosynthesis class X protein isoform X1 [Jatropha curcas]
11 Hb_007313_090 0.1421712652 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001675_300 0.1447527819 - - PREDICTED: peroxisome biogenesis protein 2 isoform X1 [Jatropha curcas]
13 Hb_003861_070 0.1447679743 - - PREDICTED: uncharacterized protein LOC105650781 [Jatropha curcas]
14 Hb_107879_010 0.1451704275 - - phosphoglycerate mutase, putative [Ricinus communis]
15 Hb_001328_030 0.1459944778 - - PREDICTED: nucleobase-ascorbate transporter 1 [Jatropha curcas]
16 Hb_000170_200 0.1461002924 - - PREDICTED: protein KRTCAP2 homolog [Jatropha curcas]
17 Hb_000731_160 0.1464927364 - - PREDICTED: adenosine deaminase-like protein [Jatropha curcas]
18 Hb_000245_220 0.146740799 - - PREDICTED: uncharacterized protein LOC105635566 [Jatropha curcas]
19 Hb_111722_010 0.1471066971 - - PREDICTED: uncharacterized protein LOC105634044 isoform X2 [Jatropha curcas]
20 Hb_001579_230 0.1484545381 - - PREDICTED: uncharacterized protein LOC105644968 [Jatropha curcas]

Gene co-expression network

sample Hb_001097_100 Hb_001097_100 Hb_114336_030 Hb_114336_030 Hb_001097_100--Hb_114336_030 Hb_001699_210 Hb_001699_210 Hb_001097_100--Hb_001699_210 Hb_001114_160 Hb_001114_160 Hb_001097_100--Hb_001114_160 Hb_032202_180 Hb_032202_180 Hb_001097_100--Hb_032202_180 Hb_000228_090 Hb_000228_090 Hb_001097_100--Hb_000228_090 Hb_012340_090 Hb_012340_090 Hb_001097_100--Hb_012340_090 Hb_114336_030--Hb_001114_160 Hb_182424_030 Hb_182424_030 Hb_114336_030--Hb_182424_030 Hb_000170_200 Hb_000170_200 Hb_114336_030--Hb_000170_200 Hb_001221_320 Hb_001221_320 Hb_114336_030--Hb_001221_320 Hb_003848_040 Hb_003848_040 Hb_114336_030--Hb_003848_040 Hb_001675_300 Hb_001675_300 Hb_001699_210--Hb_001675_300 Hb_065755_030 Hb_065755_030 Hb_001699_210--Hb_065755_030 Hb_000392_230 Hb_000392_230 Hb_001699_210--Hb_000392_230 Hb_006615_050 Hb_006615_050 Hb_001699_210--Hb_006615_050 Hb_007007_040 Hb_007007_040 Hb_001699_210--Hb_007007_040 Hb_001864_070 Hb_001864_070 Hb_001699_210--Hb_001864_070 Hb_002972_010 Hb_002972_010 Hb_001114_160--Hb_002972_010 Hb_029510_020 Hb_029510_020 Hb_001114_160--Hb_029510_020 Hb_001114_160--Hb_003848_040 Hb_003556_030 Hb_003556_030 Hb_001114_160--Hb_003556_030 Hb_029695_110 Hb_029695_110 Hb_032202_180--Hb_029695_110 Hb_001022_030 Hb_001022_030 Hb_032202_180--Hb_001022_030 Hb_001205_300 Hb_001205_300 Hb_032202_180--Hb_001205_300 Hb_000959_030 Hb_000959_030 Hb_032202_180--Hb_000959_030 Hb_003752_070 Hb_003752_070 Hb_032202_180--Hb_003752_070 Hb_003728_100 Hb_003728_100 Hb_032202_180--Hb_003728_100 Hb_158092_030 Hb_158092_030 Hb_000228_090--Hb_158092_030 Hb_000228_090--Hb_029695_110 Hb_000228_090--Hb_032202_180 Hb_000031_090 Hb_000031_090 Hb_000228_090--Hb_000031_090 Hb_007313_090 Hb_007313_090 Hb_000228_090--Hb_007313_090 Hb_001105_170 Hb_001105_170 Hb_012340_090--Hb_001105_170 Hb_002343_040 Hb_002343_040 Hb_012340_090--Hb_002343_040 Hb_000035_250 Hb_000035_250 Hb_012340_090--Hb_000035_250 Hb_001025_090 Hb_001025_090 Hb_012340_090--Hb_001025_090 Hb_012340_090--Hb_003848_040 Hb_002284_150 Hb_002284_150 Hb_012340_090--Hb_002284_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.4054 0.940353 6.68701 3.28697 3.80915 2.81093
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.68467 3.87369 0.604579 1.54798 3.36504

CAGE analysis