Hb_001102_090

Information

Type -
Description -
Location Contig1102: 82528-89502
Sequence    

Annotation

kegg
ID rcu:RCOM_1181950
description big map kinase/bmk, putative (EC:2.7.11.24)
nr
ID XP_012070208.1
description PREDICTED: mitogen-activated protein kinase 19 [Jatropha curcas]
swissprot
ID Q9LUC3
description Mitogen-activated protein kinase 19 OS=Arabidopsis thaliana GN=MPK19 PE=2 SV=2
trembl
ID A0A067KUA0
description Mitogen-activated protein kinase OS=Jatropha curcas GN=JCGZ_04930 PE=4 SV=1
Gene Ontology
ID GO:0005622
description mitogen-activated protein kinase 19

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03138: 86291-89471 , PASA_asmbl_03139: 82388-89471 , PASA_asmbl_03140: 85224-85477
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001102_090 0.0 - - PREDICTED: mitogen-activated protein kinase 19 [Jatropha curcas]
2 Hb_001294_050 0.0850769075 desease resistance Gene Name: NB-ARC Disease resistance protein RPP13, putative [Ricinus communis]
3 Hb_000336_180 0.1053740114 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005332_140 0.1133906229 - - PREDICTED: uncharacterized membrane protein At3g27390 isoform X2 [Jatropha curcas]
5 Hb_132840_020 0.1157721605 - - PREDICTED: protein LHY [Jatropha curcas]
6 Hb_000035_490 0.1162971828 transcription factor TF Family: DBB PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Jatropha curcas]
7 Hb_000009_200 0.1172066444 - - PREDICTED: UPF0496 protein At2g18630 [Jatropha curcas]
8 Hb_001951_240 0.1195340796 - - PREDICTED: protein MEI2-like 5 [Jatropha curcas]
9 Hb_011671_110 0.1196945643 - - PREDICTED: uncharacterized protein LOC105648628 [Jatropha curcas]
10 Hb_000111_390 0.1223786032 - - PREDICTED: uncharacterized protein LOC105631262 isoform X1 [Jatropha curcas]
11 Hb_002804_010 0.1306955878 - - PREDICTED: U-box domain-containing protein 33-like [Jatropha curcas]
12 Hb_005394_010 0.1308294834 - - PREDICTED: calmodulin-binding protein 25-like [Jatropha curcas]
13 Hb_002073_020 0.1321869908 - - PREDICTED: uncharacterized protein LOC105631164 [Jatropha curcas]
14 Hb_000753_140 0.1325084159 - - PREDICTED: uncharacterized protein LOC105640672 [Jatropha curcas]
15 Hb_000418_050 0.1333389226 - - PREDICTED: uncharacterized protein LOC105636892 [Jatropha curcas]
16 Hb_001627_010 0.1333777583 - - Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]
17 Hb_048476_040 0.1350772117 - - PREDICTED: uncharacterized protein LOC104611656 [Nelumbo nucifera]
18 Hb_003090_150 0.1360132044 - - PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase 1 [Jatropha curcas]
19 Hb_011381_070 0.1366986034 transcription factor TF Family: DBB PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Jatropha curcas]
20 Hb_005064_070 0.1369987605 - - PREDICTED: uncharacterized protein LOC105648318 [Jatropha curcas]

Gene co-expression network

sample Hb_001102_090 Hb_001102_090 Hb_001294_050 Hb_001294_050 Hb_001102_090--Hb_001294_050 Hb_000336_180 Hb_000336_180 Hb_001102_090--Hb_000336_180 Hb_005332_140 Hb_005332_140 Hb_001102_090--Hb_005332_140 Hb_132840_020 Hb_132840_020 Hb_001102_090--Hb_132840_020 Hb_000035_490 Hb_000035_490 Hb_001102_090--Hb_000035_490 Hb_000009_200 Hb_000009_200 Hb_001102_090--Hb_000009_200 Hb_001294_050--Hb_132840_020 Hb_001294_050--Hb_000336_180 Hb_001627_010 Hb_001627_010 Hb_001294_050--Hb_001627_010 Hb_048476_040 Hb_048476_040 Hb_001294_050--Hb_048476_040 Hb_005725_280 Hb_005725_280 Hb_001294_050--Hb_005725_280 Hb_000336_180--Hb_005725_280 Hb_000336_180--Hb_132840_020 Hb_001396_120 Hb_001396_120 Hb_000336_180--Hb_001396_120 Hb_007224_010 Hb_007224_010 Hb_000336_180--Hb_007224_010 Hb_003581_280 Hb_003581_280 Hb_005332_140--Hb_003581_280 Hb_003177_070 Hb_003177_070 Hb_005332_140--Hb_003177_070 Hb_001474_050 Hb_001474_050 Hb_005332_140--Hb_001474_050 Hb_002281_010 Hb_002281_010 Hb_005332_140--Hb_002281_010 Hb_002900_120 Hb_002900_120 Hb_005332_140--Hb_002900_120 Hb_000086_640 Hb_000086_640 Hb_132840_020--Hb_000086_640 Hb_132840_020--Hb_048476_040 Hb_011381_070 Hb_011381_070 Hb_132840_020--Hb_011381_070 Hb_132840_020--Hb_001627_010 Hb_000329_790 Hb_000329_790 Hb_132840_020--Hb_000329_790 Hb_000035_490--Hb_011381_070 Hb_000035_490--Hb_000086_640 Hb_001021_100 Hb_001021_100 Hb_000035_490--Hb_001021_100 Hb_000035_490--Hb_132840_020 Hb_001863_340 Hb_001863_340 Hb_000035_490--Hb_001863_340 Hb_011671_110 Hb_011671_110 Hb_000035_490--Hb_011671_110 Hb_005714_100 Hb_005714_100 Hb_000009_200--Hb_005714_100 Hb_008112_010 Hb_008112_010 Hb_000009_200--Hb_008112_010 Hb_001246_160 Hb_001246_160 Hb_000009_200--Hb_001246_160 Hb_000069_330 Hb_000069_330 Hb_000009_200--Hb_000069_330 Hb_000035_050 Hb_000035_050 Hb_000009_200--Hb_000035_050 Hb_056196_060 Hb_056196_060 Hb_000009_200--Hb_056196_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.86764 86.2074 77.4289 55.2616 14.7903 8.50992
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.86178 4.87979 5.23828 19.1948 30.0642

CAGE analysis