Hb_001102_170

Information

Type -
Description -
Location Contig1102: 171805-172841
Sequence    

Annotation

kegg
ID rcu:RCOM_0494120
description hypothetical protein
nr
ID XP_012066624.1
description PREDICTED: protein FLX-like 1 [Jatropha curcas]
swissprot
ID Q93V84
description Protein FLX-like 1 OS=Arabidopsis thaliana GN=FLXL1 PE=1 SV=1
trembl
ID A0A067L5L9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01787 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001102_170 0.0 - - PREDICTED: protein FLX-like 1 [Jatropha curcas]
2 Hb_177020_010 0.2730721383 - - PREDICTED: uncharacterized protein LOC105775124 [Gossypium raimondii]
3 Hb_002273_090 0.2764175998 - - -
4 Hb_003849_260 0.2830226237 - - PREDICTED: uncharacterized protein LOC105644666 [Jatropha curcas]
5 Hb_000649_010 0.2970087183 - - PREDICTED: adagio protein 3 [Jatropha curcas]
6 Hb_000014_140 0.3037301022 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
7 Hb_057217_010 0.3093823089 - - PREDICTED: uncharacterized protein LOC104594412 [Nelumbo nucifera]
8 Hb_001584_220 0.3096706344 - - galactinol synthase [Manihot esculenta]
9 Hb_010261_010 0.3097507982 - - PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Jatropha curcas]
10 Hb_006452_130 0.3099248336 - - -
11 Hb_001635_050 0.3104020113 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Nicotiana sylvestris]
12 Hb_003633_140 0.3111696562 - - PREDICTED: uncharacterized protein LOC105647486 isoform X1 [Jatropha curcas]
13 Hb_008453_070 0.3121796986 - - putative aquaporin [Vitis vinifera]
14 Hb_009848_040 0.3128426861 - - hypothetical protein B456_009G349600 [Gossypium raimondii]
15 Hb_129204_060 0.3150062196 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 20 [Jatropha curcas]
16 Hb_013818_040 0.3199108977 - - PREDICTED: pleckstrin homology domain-containing family A member 8 [Jatropha curcas]
17 Hb_002686_280 0.3199914898 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
18 Hb_001907_100 0.3205943504 - - PREDICTED: putative disease resistance protein At3g14460 [Vitis vinifera]
19 Hb_097433_020 0.3225027248 - - ATP-binding cassette transporter, putative [Ricinus communis]
20 Hb_002235_240 0.325967213 - - xenotropic and polytropic murine leukemia virus receptor ids-4, putative [Ricinus communis]

Gene co-expression network

sample Hb_001102_170 Hb_001102_170 Hb_177020_010 Hb_177020_010 Hb_001102_170--Hb_177020_010 Hb_002273_090 Hb_002273_090 Hb_001102_170--Hb_002273_090 Hb_003849_260 Hb_003849_260 Hb_001102_170--Hb_003849_260 Hb_000649_010 Hb_000649_010 Hb_001102_170--Hb_000649_010 Hb_000014_140 Hb_000014_140 Hb_001102_170--Hb_000014_140 Hb_057217_010 Hb_057217_010 Hb_001102_170--Hb_057217_010 Hb_042175_010 Hb_042175_010 Hb_177020_010--Hb_042175_010 Hb_002233_020 Hb_002233_020 Hb_177020_010--Hb_002233_020 Hb_004545_100 Hb_004545_100 Hb_177020_010--Hb_004545_100 Hb_004800_190 Hb_004800_190 Hb_177020_010--Hb_004800_190 Hb_001769_130 Hb_001769_130 Hb_177020_010--Hb_001769_130 Hb_001310_100 Hb_001310_100 Hb_177020_010--Hb_001310_100 Hb_002273_060 Hb_002273_060 Hb_002273_090--Hb_002273_060 Hb_001635_050 Hb_001635_050 Hb_002273_090--Hb_001635_050 Hb_009848_040 Hb_009848_040 Hb_002273_090--Hb_009848_040 Hb_009848_030 Hb_009848_030 Hb_002273_090--Hb_009848_030 Hb_002273_050 Hb_002273_050 Hb_002273_090--Hb_002273_050 Hb_002273_080 Hb_002273_080 Hb_002273_090--Hb_002273_080 Hb_002235_240 Hb_002235_240 Hb_003849_260--Hb_002235_240 Hb_000836_120 Hb_000836_120 Hb_003849_260--Hb_000836_120 Hb_001141_360 Hb_001141_360 Hb_003849_260--Hb_001141_360 Hb_003849_260--Hb_004800_190 Hb_001584_220 Hb_001584_220 Hb_003849_260--Hb_001584_220 Hb_002686_280 Hb_002686_280 Hb_003849_260--Hb_002686_280 Hb_001989_020 Hb_001989_020 Hb_000649_010--Hb_001989_020 Hb_001301_230 Hb_001301_230 Hb_000649_010--Hb_001301_230 Hb_000808_070 Hb_000808_070 Hb_000649_010--Hb_000808_070 Hb_000932_070 Hb_000932_070 Hb_000649_010--Hb_000932_070 Hb_003157_010 Hb_003157_010 Hb_000649_010--Hb_003157_010 Hb_004032_180 Hb_004032_180 Hb_000649_010--Hb_004032_180 Hb_008453_070 Hb_008453_070 Hb_000014_140--Hb_008453_070 Hb_005389_010 Hb_005389_010 Hb_000014_140--Hb_005389_010 Hb_189237_010 Hb_189237_010 Hb_000014_140--Hb_189237_010 Hb_001250_120 Hb_001250_120 Hb_000014_140--Hb_001250_120 Hb_050495_010 Hb_050495_010 Hb_000014_140--Hb_050495_010 Hb_001250_110 Hb_001250_110 Hb_000014_140--Hb_001250_110 Hb_172632_020 Hb_172632_020 Hb_057217_010--Hb_172632_020 Hb_004361_030 Hb_004361_030 Hb_057217_010--Hb_004361_030 Hb_001218_080 Hb_001218_080 Hb_057217_010--Hb_001218_080 Hb_002367_120 Hb_002367_120 Hb_057217_010--Hb_002367_120 Hb_000270_850 Hb_000270_850 Hb_057217_010--Hb_000270_850 Hb_126907_010 Hb_126907_010 Hb_057217_010--Hb_126907_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0394875 0.314166 0.0299682 0 0.0370774 0.160571
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0914493 0 0 0.0881018 0

CAGE analysis