Hb_001102_240

Information

Type -
Description -
Location Contig1102: 240283-241822
Sequence    

Annotation

kegg
ID rcu:RCOM_0216660
description NADH kinase, putative (EC:2.7.1.86)
nr
ID XP_012077761.1
description PREDICTED: NADH kinase isoform X1 [Jatropha curcas]
swissprot
ID Q500Y9
description NADH kinase OS=Arabidopsis thaliana GN=NADK3 PE=1 SV=1
trembl
ID A0A067KE26
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12740 PE=4 SV=1
Gene Ontology
ID GO:0005829
description nadh kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001102_240 0.0 - - PREDICTED: NADH kinase isoform X1 [Jatropha curcas]
2 Hb_005054_350 0.0889139641 - - PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
3 Hb_005725_270 0.0911033176 - - PREDICTED: uncharacterized protein LOC105630802 isoform X1 [Jatropha curcas]
4 Hb_004837_240 0.1023769251 - - PREDICTED: 40S ribosomal protein S2-4-like [Jatropha curcas]
5 Hb_002078_140 0.1025717697 - - PREDICTED: probable signal peptidase complex subunit 1 [Jatropha curcas]
6 Hb_000136_260 0.1045833801 - - 40S ribosomal protein S5A [Hevea brasiliensis]
7 Hb_005365_030 0.1059436133 - - hypothetical protein POPTR_0002s24010g [Populus trichocarpa]
8 Hb_000312_080 0.1096165477 - - PREDICTED: transmembrane protein 97-like [Jatropha curcas]
9 Hb_000684_380 0.1142494711 - - PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
10 Hb_000120_470 0.1148140807 - - hypothetical protein VITISV_017372 [Vitis vinifera]
11 Hb_011671_100 0.1155608296 - - 60S ribosomal protein L15 [Populus trichocarpa]
12 Hb_001691_140 0.1177219804 - - mitochondrial 50S ribosomal protein L21 [Hevea brasiliensis]
13 Hb_011671_440 0.1179885847 - - ATP-dependent DNA helicase pcrA, putative [Ricinus communis]
14 Hb_000032_380 0.1181890973 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000225_060 0.1182189169 - - PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
16 Hb_000099_150 0.1183493543 - - PREDICTED: calcium-dependent protein kinase 3 [Jatropha curcas]
17 Hb_007676_080 0.1187302167 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 14-like [Jatropha curcas]
18 Hb_000175_540 0.1196341867 - - PREDICTED: uncharacterized protein LOC105634886 [Jatropha curcas]
19 Hb_005305_150 0.119691203 - - PREDICTED: 40S ribosomal protein S2-4-like [Jatropha curcas]
20 Hb_008554_060 0.1210037122 - - PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_001102_240 Hb_001102_240 Hb_005054_350 Hb_005054_350 Hb_001102_240--Hb_005054_350 Hb_005725_270 Hb_005725_270 Hb_001102_240--Hb_005725_270 Hb_004837_240 Hb_004837_240 Hb_001102_240--Hb_004837_240 Hb_002078_140 Hb_002078_140 Hb_001102_240--Hb_002078_140 Hb_000136_260 Hb_000136_260 Hb_001102_240--Hb_000136_260 Hb_005365_030 Hb_005365_030 Hb_001102_240--Hb_005365_030 Hb_000120_470 Hb_000120_470 Hb_005054_350--Hb_000120_470 Hb_000768_090 Hb_000768_090 Hb_005054_350--Hb_000768_090 Hb_003435_020 Hb_003435_020 Hb_005054_350--Hb_003435_020 Hb_001758_100 Hb_001758_100 Hb_005054_350--Hb_001758_100 Hb_000032_380 Hb_000032_380 Hb_005054_350--Hb_000032_380 Hb_005054_350--Hb_002078_140 Hb_002197_050 Hb_002197_050 Hb_005725_270--Hb_002197_050 Hb_003780_030 Hb_003780_030 Hb_005725_270--Hb_003780_030 Hb_005725_270--Hb_005054_350 Hb_108350_010 Hb_108350_010 Hb_005725_270--Hb_108350_010 Hb_172632_100 Hb_172632_100 Hb_005725_270--Hb_172632_100 Hb_003813_050 Hb_003813_050 Hb_005725_270--Hb_003813_050 Hb_000684_380 Hb_000684_380 Hb_004837_240--Hb_000684_380 Hb_002320_040 Hb_002320_040 Hb_004837_240--Hb_002320_040 Hb_000589_120 Hb_000589_120 Hb_004837_240--Hb_000589_120 Hb_014109_040 Hb_014109_040 Hb_004837_240--Hb_014109_040 Hb_007576_080 Hb_007576_080 Hb_004837_240--Hb_007576_080 Hb_000317_240 Hb_000317_240 Hb_004837_240--Hb_000317_240 Hb_124953_020 Hb_124953_020 Hb_002078_140--Hb_124953_020 Hb_001691_140 Hb_001691_140 Hb_002078_140--Hb_001691_140 Hb_001341_150 Hb_001341_150 Hb_002078_140--Hb_001341_150 Hb_002078_140--Hb_000136_260 Hb_001016_150 Hb_001016_150 Hb_002078_140--Hb_001016_150 Hb_001863_430 Hb_001863_430 Hb_002078_140--Hb_001863_430 Hb_000538_120 Hb_000538_120 Hb_000136_260--Hb_000538_120 Hb_000099_150 Hb_000099_150 Hb_000136_260--Hb_000099_150 Hb_000419_020 Hb_000419_020 Hb_000136_260--Hb_000419_020 Hb_000136_350 Hb_000136_350 Hb_000136_260--Hb_000136_350 Hb_004109_340 Hb_004109_340 Hb_000136_260--Hb_004109_340 Hb_005365_030--Hb_124953_020 Hb_029388_020 Hb_029388_020 Hb_005365_030--Hb_029388_020 Hb_005365_030--Hb_002078_140 Hb_005365_030--Hb_002320_040 Hb_005365_030--Hb_001691_140 Hb_027472_040 Hb_027472_040 Hb_005365_030--Hb_027472_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.627054 0.817394 1.11228 0.888466 0.694306 1.21154
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.879544 2.39781 1.17845 1.63685 0.373947

CAGE analysis