Hb_001114_040

Information

Type -
Description -
Location Contig1114: 37664-38708
Sequence    

Annotation

kegg
ID sot:102582478
description uncharacterized LOC102582478
nr
ID XP_009760879.1
description PREDICTED: uncharacterized protein LOC104213140 [Nicotiana sylvestris]
swissprot
ID -
description -
trembl
ID A0A067KUC3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10852 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001114_040 0.0 - - PREDICTED: uncharacterized protein LOC104213140 [Nicotiana sylvestris]
2 Hb_011986_010 0.1087071481 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
3 Hb_063405_020 0.2508539009 - - PREDICTED: uncharacterized protein LOC105155919 [Sesamum indicum]
4 Hb_000122_210 0.2613349832 - - -
5 Hb_007054_050 0.2703230465 - - -
6 Hb_009150_030 0.2804444832 - - hypothetical protein POPTR_0010s14920g [Populus trichocarpa]
7 Hb_002450_170 0.2804822976 transcription factor TF Family: FAR1 Protein FAR1-RELATED SEQUENCE 5 [Glycine soja]
8 Hb_003835_100 0.2904251733 - - PREDICTED: putative U-box domain-containing protein 50 [Jatropha curcas]
9 Hb_000640_030 0.2965340806 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
10 Hb_077935_010 0.2988018165 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_000670_100 0.2994728 - - PREDICTED: D-3-phosphoglycerate dehydrogenase 3, chloroplastic-like [Jatropha curcas]
12 Hb_012572_020 0.3047786268 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
13 Hb_000001_130 0.3055023399 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
14 Hb_000120_040 0.3072799561 - - -
15 Hb_000283_080 0.3076831157 - - -
16 Hb_001188_120 0.3089303767 - - hypothetical protein JCGZ_05575 [Jatropha curcas]
17 Hb_002360_030 0.3115173145 - - PREDICTED: uncharacterized protein LOC105436302 [Cucumis sativus]
18 Hb_007199_010 0.3124492578 - - PREDICTED: protein kinase APK1A, chloroplastic [Nelumbo nucifera]
19 Hb_002205_240 0.3136098881 - - hypothetical protein PRUPE_ppa005987mg [Prunus persica]
20 Hb_005505_040 0.3136409872 - - -

Gene co-expression network

sample Hb_001114_040 Hb_001114_040 Hb_011986_010 Hb_011986_010 Hb_001114_040--Hb_011986_010 Hb_063405_020 Hb_063405_020 Hb_001114_040--Hb_063405_020 Hb_000122_210 Hb_000122_210 Hb_001114_040--Hb_000122_210 Hb_007054_050 Hb_007054_050 Hb_001114_040--Hb_007054_050 Hb_009150_030 Hb_009150_030 Hb_001114_040--Hb_009150_030 Hb_002450_170 Hb_002450_170 Hb_001114_040--Hb_002450_170 Hb_077935_010 Hb_077935_010 Hb_011986_010--Hb_077935_010 Hb_011986_010--Hb_007054_050 Hb_011986_010--Hb_009150_030 Hb_011986_010--Hb_000122_210 Hb_011986_010--Hb_063405_020 Hb_002360_030 Hb_002360_030 Hb_063405_020--Hb_002360_030 Hb_011310_080 Hb_011310_080 Hb_063405_020--Hb_011310_080 Hb_002188_140 Hb_002188_140 Hb_063405_020--Hb_002188_140 Hb_000001_130 Hb_000001_130 Hb_063405_020--Hb_000001_130 Hb_063405_020--Hb_007054_050 Hb_000283_080 Hb_000283_080 Hb_000122_210--Hb_000283_080 Hb_007747_210 Hb_007747_210 Hb_000122_210--Hb_007747_210 Hb_000120_040 Hb_000120_040 Hb_000122_210--Hb_000120_040 Hb_006420_050 Hb_006420_050 Hb_000122_210--Hb_006420_050 Hb_042202_030 Hb_042202_030 Hb_000122_210--Hb_042202_030 Hb_002338_050 Hb_002338_050 Hb_000122_210--Hb_002338_050 Hb_000460_070 Hb_000460_070 Hb_007054_050--Hb_000460_070 Hb_007054_050--Hb_002360_030 Hb_008698_010 Hb_008698_010 Hb_007054_050--Hb_008698_010 Hb_000683_080 Hb_000683_080 Hb_007054_050--Hb_000683_080 Hb_007054_050--Hb_000122_210 Hb_004218_260 Hb_004218_260 Hb_007054_050--Hb_004218_260 Hb_003124_110 Hb_003124_110 Hb_009150_030--Hb_003124_110 Hb_009150_030--Hb_000120_040 Hb_001214_180 Hb_001214_180 Hb_009150_030--Hb_001214_180 Hb_007576_150 Hb_007576_150 Hb_009150_030--Hb_007576_150 Hb_002290_030 Hb_002290_030 Hb_009150_030--Hb_002290_030 Hb_000318_130 Hb_000318_130 Hb_009150_030--Hb_000318_130 Hb_002450_170--Hb_007054_050 Hb_131872_010 Hb_131872_010 Hb_002450_170--Hb_131872_010 Hb_002450_170--Hb_011986_010 Hb_007317_130 Hb_007317_130 Hb_002450_170--Hb_007317_130 Hb_002450_170--Hb_063405_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.103656 0.0329721 0 0.0821471 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0946384 0.0743841 0.130913 0.152141 0.289866

CAGE analysis