Hb_001114_230

Information

Type -
Description -
Location Contig1114: 217337-217578
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001114_230 0.0 - - -
2 Hb_009372_010 0.1380510761 - - -
3 Hb_000836_370 0.1613707297 - - PREDICTED: protein REVEILLE 3-like isoform X1 [Jatropha curcas]
4 Hb_000834_240 0.1618661621 - - hypothetical protein JCGZ_07230 [Jatropha curcas]
5 Hb_003506_070 0.1872346561 - - PREDICTED: calcineurin B-like protein 7 isoform X2 [Jatropha curcas]
6 Hb_012725_040 0.1893464295 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
7 Hb_080147_080 0.1918865653 - - peroxiredoxin, putative [Ricinus communis]
8 Hb_011909_060 0.1920706325 - - PREDICTED: zinc finger protein CONSTANS-LIKE 1 [Jatropha curcas]
9 Hb_001231_080 0.1927442619 - - PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Fragaria vesca subsp. vesca]
10 Hb_001907_100 0.1940273109 - - PREDICTED: putative disease resistance protein At3g14460 [Vitis vinifera]
11 Hb_005000_300 0.196777635 transcription factor TF Family: TRAF putative regulatory protein NPR1 [Hevea brasiliensis]
12 Hb_000465_080 0.1972841405 - - PREDICTED: E3 ubiquitin-protein ligase RBBP6-like [Jatropha curcas]
13 Hb_001484_100 0.2009351377 - - PREDICTED: cyanate hydratase [Jatropha curcas]
14 Hb_027402_040 0.2021809164 - - Thioredoxin II, putative [Ricinus communis]
15 Hb_002485_040 0.202946424 - - PREDICTED: uncharacterized protein LOC105637426 [Jatropha curcas]
16 Hb_001307_010 0.2038721645 - - PREDICTED: uncharacterized protein LOC103939917 [Pyrus x bretschneideri]
17 Hb_005054_310 0.2061760588 - - PREDICTED: glycosyltransferase family 64 protein C4 [Jatropha curcas]
18 Hb_001950_020 0.2061985753 - - Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative [Ricinus communis]
19 Hb_002326_070 0.207899605 - - ent-kaurene oxidase, chloroplastic [Jatropha curcas]
20 Hb_000363_280 0.20835273 transcription factor TF Family: SWI/SNF-BAF60b PREDICTED: angiomotin [Cucumis sativus]

Gene co-expression network

sample Hb_001114_230 Hb_001114_230 Hb_009372_010 Hb_009372_010 Hb_001114_230--Hb_009372_010 Hb_000836_370 Hb_000836_370 Hb_001114_230--Hb_000836_370 Hb_000834_240 Hb_000834_240 Hb_001114_230--Hb_000834_240 Hb_003506_070 Hb_003506_070 Hb_001114_230--Hb_003506_070 Hb_012725_040 Hb_012725_040 Hb_001114_230--Hb_012725_040 Hb_080147_080 Hb_080147_080 Hb_001114_230--Hb_080147_080 Hb_028795_010 Hb_028795_010 Hb_009372_010--Hb_028795_010 Hb_021576_140 Hb_021576_140 Hb_009372_010--Hb_021576_140 Hb_007481_030 Hb_007481_030 Hb_009372_010--Hb_007481_030 Hb_153161_010 Hb_153161_010 Hb_009372_010--Hb_153161_010 Hb_003633_140 Hb_003633_140 Hb_009372_010--Hb_003633_140 Hb_005054_310 Hb_005054_310 Hb_000836_370--Hb_005054_310 Hb_005000_300 Hb_005000_300 Hb_000836_370--Hb_005000_300 Hb_000056_300 Hb_000056_300 Hb_000836_370--Hb_000056_300 Hb_001231_080 Hb_001231_080 Hb_000836_370--Hb_001231_080 Hb_003078_030 Hb_003078_030 Hb_000836_370--Hb_003078_030 Hb_001484_100 Hb_001484_100 Hb_000836_370--Hb_001484_100 Hb_000834_240--Hb_000836_370 Hb_000152_640 Hb_000152_640 Hb_000834_240--Hb_000152_640 Hb_000179_180 Hb_000179_180 Hb_000834_240--Hb_000179_180 Hb_001950_020 Hb_001950_020 Hb_000834_240--Hb_001950_020 Hb_000834_240--Hb_005054_310 Hb_000465_080 Hb_000465_080 Hb_003506_070--Hb_000465_080 Hb_003125_030 Hb_003125_030 Hb_003506_070--Hb_003125_030 Hb_000540_110 Hb_000540_110 Hb_003506_070--Hb_000540_110 Hb_001525_010 Hb_001525_010 Hb_003506_070--Hb_001525_010 Hb_011909_060 Hb_011909_060 Hb_003506_070--Hb_011909_060 Hb_004218_090 Hb_004218_090 Hb_003506_070--Hb_004218_090 Hb_185513_010 Hb_185513_010 Hb_012725_040--Hb_185513_010 Hb_001865_060 Hb_001865_060 Hb_012725_040--Hb_001865_060 Hb_006111_030 Hb_006111_030 Hb_012725_040--Hb_006111_030 Hb_001258_150 Hb_001258_150 Hb_012725_040--Hb_001258_150 Hb_003494_060 Hb_003494_060 Hb_012725_040--Hb_003494_060 Hb_001141_360 Hb_001141_360 Hb_012725_040--Hb_001141_360 Hb_006420_020 Hb_006420_020 Hb_080147_080--Hb_006420_020 Hb_075449_020 Hb_075449_020 Hb_080147_080--Hb_075449_020 Hb_128376_010 Hb_128376_010 Hb_080147_080--Hb_128376_010 Hb_000390_220 Hb_000390_220 Hb_080147_080--Hb_000390_220 Hb_000878_100 Hb_000878_100 Hb_080147_080--Hb_000878_100 Hb_002742_080 Hb_002742_080 Hb_080147_080--Hb_002742_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
317.421 1436.23 497.157 174.938 268.992 790.512
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
108.976 96.8025 52.5775 75.6924 128.465

CAGE analysis