Hb_001124_230

Information

Type -
Description -
Location Contig1124: 217641-218891
Sequence    

Annotation

kegg
ID pop:POPTR_0008s20940g
description POPTRDRAFT_820932; isoflavone reductase-related family protein
nr
ID XP_012069401.1
description PREDICTED: divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic [Jatropha curcas]
swissprot
ID J9RYI6
description Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic OS=Cucumis sativus GN=DVR PE=1 SV=1
trembl
ID A0A067KUX3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02019 PE=4 SV=1
Gene Ontology
ID GO:0009534
description divinyl chlorophyllide a 8-vinyl- chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03824: 217523-219174
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001124_230 0.0 - - PREDICTED: divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic [Jatropha curcas]
2 Hb_000616_030 0.1044313321 - - PREDICTED: dentin sialophosphoprotein [Jatropha curcas]
3 Hb_000005_370 0.1127760695 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105634024 [Jatropha curcas]
4 Hb_000612_090 0.1211291647 - - PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Jatropha curcas]
5 Hb_008112_020 0.1215582942 - - PREDICTED: magnesium transporter MRS2-11, chloroplastic [Jatropha curcas]
6 Hb_000300_680 0.1267844052 - - PREDICTED: uncharacterized protein LOC105632625 isoform X1 [Jatropha curcas]
7 Hb_000684_400 0.1268252713 - - PREDICTED: uncharacterized protein LOC105642159 [Jatropha curcas]
8 Hb_006472_040 0.1290751837 - - PREDICTED: inner membrane protein PPF-1, chloroplastic [Jatropha curcas]
9 Hb_010620_030 0.130853851 - - beta-amyrin synthase [Euphorbia tirucalli]
10 Hb_002235_110 0.1312824043 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
11 Hb_000208_270 0.1317673489 - - PREDICTED: malate dehydrogenase [NADP], chloroplastic [Jatropha curcas]
12 Hb_000975_050 0.1323218675 - - PREDICTED: inner membrane protein PPF-1, chloroplastic [Jatropha curcas]
13 Hb_003849_070 0.1348271329 - - PREDICTED: uncharacterized protein LOC105644690 [Jatropha curcas]
14 Hb_000805_010 0.1359066165 - - PREDICTED: uncharacterized protein LOC105629931 [Jatropha curcas]
15 Hb_022693_010 0.1383461221 - - pectin acetylesterase, putative [Ricinus communis]
16 Hb_002814_010 0.1391102584 - - PREDICTED: adenylate kinase 5, chloroplastic [Jatropha curcas]
17 Hb_031330_020 0.1402466501 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
18 Hb_000317_180 0.1403111256 - - PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Jatropha curcas]
19 Hb_020141_030 0.1404638672 - - solanesyl diphosphate synthase, putative [Ricinus communis]
20 Hb_004979_050 0.1405442231 - - hypothetical protein JCGZ_23771 [Jatropha curcas]

Gene co-expression network

sample Hb_001124_230 Hb_001124_230 Hb_000616_030 Hb_000616_030 Hb_001124_230--Hb_000616_030 Hb_000005_370 Hb_000005_370 Hb_001124_230--Hb_000005_370 Hb_000612_090 Hb_000612_090 Hb_001124_230--Hb_000612_090 Hb_008112_020 Hb_008112_020 Hb_001124_230--Hb_008112_020 Hb_000300_680 Hb_000300_680 Hb_001124_230--Hb_000300_680 Hb_000684_400 Hb_000684_400 Hb_001124_230--Hb_000684_400 Hb_000616_030--Hb_000300_680 Hb_000441_050 Hb_000441_050 Hb_000616_030--Hb_000441_050 Hb_000616_030--Hb_000612_090 Hb_005977_060 Hb_005977_060 Hb_000616_030--Hb_005977_060 Hb_000975_050 Hb_000975_050 Hb_000616_030--Hb_000975_050 Hb_003929_240 Hb_003929_240 Hb_000005_370--Hb_003929_240 Hb_003849_070 Hb_003849_070 Hb_000005_370--Hb_003849_070 Hb_001474_060 Hb_001474_060 Hb_000005_370--Hb_001474_060 Hb_001832_170 Hb_001832_170 Hb_000005_370--Hb_001832_170 Hb_001257_050 Hb_001257_050 Hb_000005_370--Hb_001257_050 Hb_002662_110 Hb_002662_110 Hb_000612_090--Hb_002662_110 Hb_074197_030 Hb_074197_030 Hb_000612_090--Hb_074197_030 Hb_002235_110 Hb_002235_110 Hb_000612_090--Hb_002235_110 Hb_000612_090--Hb_000441_050 Hb_002817_040 Hb_002817_040 Hb_000612_090--Hb_002817_040 Hb_000612_090--Hb_005977_060 Hb_006472_040 Hb_006472_040 Hb_008112_020--Hb_006472_040 Hb_001195_290 Hb_001195_290 Hb_008112_020--Hb_001195_290 Hb_022693_010 Hb_022693_010 Hb_008112_020--Hb_022693_010 Hb_004979_050 Hb_004979_050 Hb_008112_020--Hb_004979_050 Hb_000679_320 Hb_000679_320 Hb_008112_020--Hb_000679_320 Hb_169383_010 Hb_169383_010 Hb_008112_020--Hb_169383_010 Hb_031330_020 Hb_031330_020 Hb_000300_680--Hb_031330_020 Hb_000329_080 Hb_000329_080 Hb_000300_680--Hb_000329_080 Hb_001916_150 Hb_001916_150 Hb_000300_680--Hb_001916_150 Hb_000163_110 Hb_000163_110 Hb_000300_680--Hb_000163_110 Hb_000300_680--Hb_000975_050 Hb_000684_400--Hb_169383_010 Hb_000684_400--Hb_006472_040 Hb_000227_100 Hb_000227_100 Hb_000684_400--Hb_000227_100 Hb_000684_400--Hb_008112_020 Hb_000684_400--Hb_000005_370
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.25406 3.97273 16.6233 26.4468 1.14792 2.08602
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.617715 1.76146 3.00052 4.74112 57.4511

CAGE analysis