Hb_001131_070

Information

Type -
Description -
Location Contig1131: 95485-96051
Sequence    

Annotation

kegg
ID pop:POPTR_0018s08200g
description POPTRDRAFT_778875; hypothetical protein
nr
ID XP_012077383.1
description PREDICTED: uncharacterized protein LOC105638217 [Jatropha curcas]
swissprot
ID P59082
description Lachrymatory-factor synthase OS=Allium cepa GN=LFS PE=1 SV=1
trembl
ID A0A067KD66
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07737 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001131_070 0.0 - - PREDICTED: uncharacterized protein LOC105638217 [Jatropha curcas]
2 Hb_008554_010 0.1464060521 - - -
3 Hb_073096_010 0.1497651394 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 45-like [Jatropha curcas]
4 Hb_004195_030 0.1667004923 - - hypothetical protein POPTR_0006s17880g, partial [Populus trichocarpa]
5 Hb_000699_190 0.1877957174 - - unknown [Populus trichocarpa]
6 Hb_002461_080 0.193036771 - - PREDICTED: probable pectinesterase 53 [Jatropha curcas]
7 Hb_001373_080 0.2045579114 desease resistance Gene Name: NB-ARC leucine-rich repeat-containing protein, putative [Ricinus communis]
8 Hb_000181_450 0.2121781647 - - hypothetical protein JCGZ_20984 [Jatropha curcas]
9 Hb_160459_030 0.2158887831 - - PREDICTED: uncharacterized protein LOC105648122 [Jatropha curcas]
10 Hb_003216_020 0.2197027557 transcription factor TF Family: Orphans PREDICTED: histidine kinase 2 [Jatropha curcas]
11 Hb_013607_010 0.2233523512 transcription factor TF Family: bZIP PREDICTED: transcription factor TGA3 [Jatropha curcas]
12 Hb_156850_110 0.2248674838 - - PREDICTED: vinorine synthase-like [Jatropha curcas]
13 Hb_183539_010 0.2263028296 - - hypothetical protein POPTR_0005s04441g [Populus trichocarpa]
14 Hb_000509_040 0.2263614579 - - hypothetical protein VITISV_009716 [Vitis vinifera]
15 Hb_066320_010 0.2273806677 - - hypothetical protein VITISV_027639 [Vitis vinifera]
16 Hb_005605_030 0.2289808812 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
17 Hb_009510_050 0.2303580443 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000991_110 0.2323016229 - - PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
19 Hb_001628_030 0.236577826 - - PREDICTED: uncharacterized protein LOC105629266 isoform X1 [Jatropha curcas]
20 Hb_127400_010 0.2382926602 desease resistance Gene Name: NB-ARC phosphoprotein phosphatase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001131_070 Hb_001131_070 Hb_008554_010 Hb_008554_010 Hb_001131_070--Hb_008554_010 Hb_073096_010 Hb_073096_010 Hb_001131_070--Hb_073096_010 Hb_004195_030 Hb_004195_030 Hb_001131_070--Hb_004195_030 Hb_000699_190 Hb_000699_190 Hb_001131_070--Hb_000699_190 Hb_002461_080 Hb_002461_080 Hb_001131_070--Hb_002461_080 Hb_001373_080 Hb_001373_080 Hb_001131_070--Hb_001373_080 Hb_008554_010--Hb_001373_080 Hb_008554_010--Hb_004195_030 Hb_008554_010--Hb_002461_080 Hb_000431_180 Hb_000431_180 Hb_008554_010--Hb_000431_180 Hb_000331_690 Hb_000331_690 Hb_008554_010--Hb_000331_690 Hb_073096_010--Hb_000699_190 Hb_073096_010--Hb_002461_080 Hb_073096_010--Hb_008554_010 Hb_000181_450 Hb_000181_450 Hb_073096_010--Hb_000181_450 Hb_000221_070 Hb_000221_070 Hb_073096_010--Hb_000221_070 Hb_131957_010 Hb_131957_010 Hb_004195_030--Hb_131957_010 Hb_005396_110 Hb_005396_110 Hb_004195_030--Hb_005396_110 Hb_132517_010 Hb_132517_010 Hb_004195_030--Hb_132517_010 Hb_087468_010 Hb_087468_010 Hb_004195_030--Hb_087468_010 Hb_160459_030 Hb_160459_030 Hb_004195_030--Hb_160459_030 Hb_042553_010 Hb_042553_010 Hb_000699_190--Hb_042553_010 Hb_004611_060 Hb_004611_060 Hb_000699_190--Hb_004611_060 Hb_187697_010 Hb_187697_010 Hb_000699_190--Hb_187697_010 Hb_007137_030 Hb_007137_030 Hb_000699_190--Hb_007137_030 Hb_002461_080--Hb_000181_450 Hb_011861_110 Hb_011861_110 Hb_002461_080--Hb_011861_110 Hb_002461_080--Hb_001373_080 Hb_131591_010 Hb_131591_010 Hb_001373_080--Hb_131591_010 Hb_001373_080--Hb_000431_180 Hb_001691_190 Hb_001691_190 Hb_001373_080--Hb_001691_190 Hb_002621_030 Hb_002621_030 Hb_001373_080--Hb_002621_030 Hb_002248_090 Hb_002248_090 Hb_001373_080--Hb_002248_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.234307 0.0384212 0.0958009 0 0.0421929
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0355675 0

CAGE analysis