Hb_001131_100

Information

Type -
Description -
Location Contig1131: 120416-121091
Sequence    

Annotation

kegg
ID rcu:RCOM_0800830
description hypothetical protein
nr
ID XP_012077567.1
description PREDICTED: uncharacterized protein LOC105638386 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KDH2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07738 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001131_100 0.0 - - PREDICTED: uncharacterized protein LOC105638386 [Jatropha curcas]
2 Hb_000270_010 0.1257788985 - - conserved hypothetical protein [Ricinus communis]
3 Hb_004089_010 0.1294376233 - - hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]
4 Hb_000331_690 0.1337526415 - - PREDICTED: F-box/WD repeat-containing protein 11-like [Jatropha curcas]
5 Hb_011928_030 0.1389079501 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]
6 Hb_004195_030 0.1410205312 - - hypothetical protein POPTR_0006s17880g, partial [Populus trichocarpa]
7 Hb_133646_010 0.14135823 - - hypothetical protein RCOM_1044030 [Ricinus communis]
8 Hb_000111_150 0.1433312324 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
9 Hb_087468_010 0.1465235134 - - PREDICTED: uncharacterized protein LOC100246093 [Vitis vinifera]
10 Hb_024857_010 0.1482394871 - - glutaredoxin 2.1 [Hevea brasiliensis]
11 Hb_001529_020 0.1486854005 - - ankyrin repeat-containing protein, putative [Ricinus communis]
12 Hb_017417_020 0.1496578261 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
13 Hb_001998_130 0.15048904 transcription factor TF Family: WRKY WRKY transcription factor 35 family protein [Populus trichocarpa]
14 Hb_000431_180 0.159824049 - - PREDICTED: peroxidase 55 [Jatropha curcas]
15 Hb_008554_010 0.1608134257 - - -
16 Hb_001510_050 0.163809561 - - zinc finger protein, putative [Ricinus communis]
17 Hb_005396_110 0.1641361859 - - conserved hypothetical protein [Ricinus communis]
18 Hb_004607_180 0.1660527245 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000431_030 0.166244047 transcription factor TF Family: C2H2 zinc finger family protein [Populus trichocarpa]
20 Hb_077562_010 0.1674465204 - - PREDICTED: WAT1-related protein At5g07050 [Jatropha curcas]

Gene co-expression network

sample Hb_001131_100 Hb_001131_100 Hb_000270_010 Hb_000270_010 Hb_001131_100--Hb_000270_010 Hb_004089_010 Hb_004089_010 Hb_001131_100--Hb_004089_010 Hb_000331_690 Hb_000331_690 Hb_001131_100--Hb_000331_690 Hb_011928_030 Hb_011928_030 Hb_001131_100--Hb_011928_030 Hb_004195_030 Hb_004195_030 Hb_001131_100--Hb_004195_030 Hb_133646_010 Hb_133646_010 Hb_001131_100--Hb_133646_010 Hb_017417_020 Hb_017417_020 Hb_000270_010--Hb_017417_020 Hb_000431_180 Hb_000431_180 Hb_000270_010--Hb_000431_180 Hb_069232_010 Hb_069232_010 Hb_000270_010--Hb_069232_010 Hb_001691_190 Hb_001691_190 Hb_000270_010--Hb_001691_190 Hb_000270_010--Hb_011928_030 Hb_002393_060 Hb_002393_060 Hb_004089_010--Hb_002393_060 Hb_001998_130 Hb_001998_130 Hb_004089_010--Hb_001998_130 Hb_004767_010 Hb_004767_010 Hb_004089_010--Hb_004767_010 Hb_091826_010 Hb_091826_010 Hb_004089_010--Hb_091826_010 Hb_161954_010 Hb_161954_010 Hb_004089_010--Hb_161954_010 Hb_000331_690--Hb_017417_020 Hb_000331_690--Hb_069232_010 Hb_000331_690--Hb_000270_010 Hb_005380_030 Hb_005380_030 Hb_000331_690--Hb_005380_030 Hb_008554_010 Hb_008554_010 Hb_000331_690--Hb_008554_010 Hb_000347_370 Hb_000347_370 Hb_011928_030--Hb_000347_370 Hb_002248_090 Hb_002248_090 Hb_011928_030--Hb_002248_090 Hb_024857_010 Hb_024857_010 Hb_011928_030--Hb_024857_010 Hb_011928_030--Hb_001691_190 Hb_004267_070 Hb_004267_070 Hb_011928_030--Hb_004267_070 Hb_131957_010 Hb_131957_010 Hb_004195_030--Hb_131957_010 Hb_005396_110 Hb_005396_110 Hb_004195_030--Hb_005396_110 Hb_132517_010 Hb_132517_010 Hb_004195_030--Hb_132517_010 Hb_087468_010 Hb_087468_010 Hb_004195_030--Hb_087468_010 Hb_004195_030--Hb_008554_010 Hb_160459_030 Hb_160459_030 Hb_004195_030--Hb_160459_030 Hb_176149_010 Hb_176149_010 Hb_133646_010--Hb_176149_010 Hb_000656_360 Hb_000656_360 Hb_133646_010--Hb_000656_360 Hb_004098_010 Hb_004098_010 Hb_133646_010--Hb_004098_010 Hb_027913_010 Hb_027913_010 Hb_133646_010--Hb_027913_010 Hb_133646_010--Hb_000347_370 Hb_001510_050 Hb_001510_050 Hb_133646_010--Hb_001510_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.33323 0.11671 1.97895 0 0.068383
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.628547 0

CAGE analysis