Hb_001133_010

Information

Type -
Description -
Location Contig1133: 11402-15536
Sequence    

Annotation

kegg
ID rcu:RCOM_1380990
description hypothetical protein
nr
ID XP_002515682.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q6N075
description Molybdate-anion transporter OS=Homo sapiens GN=MFSD5 PE=1 SV=2
trembl
ID B9RPL3
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1380990 PE=4 SV=1
Gene Ontology
ID GO:0005768
description molybdate-anion transporter-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03957: 11445-15502 , PASA_asmbl_03958: 12615-12791 , PASA_asmbl_03959: 14646-14810
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001133_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000836_600 0.080075236 - - PREDICTED: delta(8)-fatty-acid desaturase 2 [Jatropha curcas]
3 Hb_006054_030 0.114971378 - - PREDICTED: protein GPR107-like [Jatropha curcas]
4 Hb_000200_170 0.117866392 - - PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Populus euphratica]
5 Hb_143766_030 0.1238214805 - - protein with unknown function [Ricinus communis]
6 Hb_002875_070 0.1252373271 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
7 Hb_000069_780 0.130087152 - - atpob1, putative [Ricinus communis]
8 Hb_000103_420 0.1320219191 - - PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Populus euphratica]
9 Hb_001369_780 0.1344229601 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002849_070 0.1359256683 - - PREDICTED: protein BPS1, chloroplastic [Jatropha curcas]
11 Hb_008248_020 0.1366990682 transcription factor TF Family: DBB zinc finger protein, putative [Ricinus communis]
12 Hb_001754_060 0.1382632044 - - Xyloglucan 6-xylosyltransferase, putative [Ricinus communis]
13 Hb_000735_140 0.1387833766 - - 3-glucanase family protein [Populus trichocarpa]
14 Hb_004724_330 0.1399415027 - - Capsanthin/capsorubin synthase, chloroplast precursor, putative [Ricinus communis]
15 Hb_005714_100 0.1422728687 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Vitis vinifera]
16 Hb_138585_100 0.1428040543 - - PREDICTED: uncharacterized protein LOC105648740 [Jatropha curcas]
17 Hb_008112_010 0.1437781676 - - PREDICTED: UDP-glucuronate 4-epimerase 1 [Jatropha curcas]
18 Hb_023344_110 0.1483461925 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 [Jatropha curcas]
19 Hb_004013_020 0.1486889628 - - PREDICTED: F-box protein SKIP2 [Jatropha curcas]
20 Hb_010661_010 0.1490488377 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9H isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001133_010 Hb_001133_010 Hb_000836_600 Hb_000836_600 Hb_001133_010--Hb_000836_600 Hb_006054_030 Hb_006054_030 Hb_001133_010--Hb_006054_030 Hb_000200_170 Hb_000200_170 Hb_001133_010--Hb_000200_170 Hb_143766_030 Hb_143766_030 Hb_001133_010--Hb_143766_030 Hb_002875_070 Hb_002875_070 Hb_001133_010--Hb_002875_070 Hb_000069_780 Hb_000069_780 Hb_001133_010--Hb_000069_780 Hb_004013_020 Hb_004013_020 Hb_000836_600--Hb_004013_020 Hb_000836_600--Hb_000200_170 Hb_000836_600--Hb_143766_030 Hb_002876_250 Hb_002876_250 Hb_000836_600--Hb_002876_250 Hb_002849_070 Hb_002849_070 Hb_000836_600--Hb_002849_070 Hb_000941_080 Hb_000941_080 Hb_006054_030--Hb_000941_080 Hb_001369_780 Hb_001369_780 Hb_006054_030--Hb_001369_780 Hb_006054_030--Hb_000069_780 Hb_001410_130 Hb_001410_130 Hb_006054_030--Hb_001410_130 Hb_000270_230 Hb_000270_230 Hb_006054_030--Hb_000270_230 Hb_000460_060 Hb_000460_060 Hb_006054_030--Hb_000460_060 Hb_000200_170--Hb_002849_070 Hb_000056_080 Hb_000056_080 Hb_000200_170--Hb_000056_080 Hb_004724_330 Hb_004724_330 Hb_000200_170--Hb_004724_330 Hb_000203_270 Hb_000203_270 Hb_000200_170--Hb_000203_270 Hb_000200_170--Hb_143766_030 Hb_001818_060 Hb_001818_060 Hb_000200_170--Hb_001818_060 Hb_002248_120 Hb_002248_120 Hb_143766_030--Hb_002248_120 Hb_003605_220 Hb_003605_220 Hb_143766_030--Hb_003605_220 Hb_000735_140 Hb_000735_140 Hb_143766_030--Hb_000735_140 Hb_023344_110 Hb_023344_110 Hb_143766_030--Hb_023344_110 Hb_143766_030--Hb_000069_780 Hb_005714_100 Hb_005714_100 Hb_002875_070--Hb_005714_100 Hb_000035_050 Hb_000035_050 Hb_002875_070--Hb_000035_050 Hb_002759_260 Hb_002759_260 Hb_002875_070--Hb_002759_260 Hb_003849_190 Hb_003849_190 Hb_002875_070--Hb_003849_190 Hb_000009_200 Hb_000009_200 Hb_002875_070--Hb_000009_200 Hb_000069_780--Hb_000270_230 Hb_000069_780--Hb_001369_780 Hb_000059_130 Hb_000059_130 Hb_000069_780--Hb_000059_130 Hb_002387_040 Hb_002387_040 Hb_000069_780--Hb_002387_040 Hb_003752_120 Hb_003752_120 Hb_000069_780--Hb_003752_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.3965 87.7638 28.7427 74.9548 10.9622 10.0487
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.0522 6.30218 14.8897 15.9584 25.1379

CAGE analysis