Hb_001134_040

Information

Type -
Description -
Location Contig1134: 107639-108943
Sequence    

Annotation

kegg
ID tcc:TCM_038579
description Plant natriuretic peptide A
nr
ID XP_012075946.1
description PREDICTED: EG45-like domain containing protein [Jatropha curcas]
swissprot
ID Q9ZP41
description EG45-like domain containing protein OS=Citrus jambhiri GN=CjBAp12 PE=1 SV=1
trembl
ID A0A067LBQ4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15471 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03988: 107762-108968
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001134_040 0.0 - - PREDICTED: EG45-like domain containing protein [Jatropha curcas]
2 Hb_002805_230 0.0476715725 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
3 Hb_058620_010 0.0565132443 - - cytochrome P450, putative [Ricinus communis]
4 Hb_003090_070 0.0623934347 - - PREDICTED: laccase-7 [Jatropha curcas]
5 Hb_000712_070 0.0628275742 - - conserved hypothetical protein [Ricinus communis]
6 Hb_007417_020 0.06421369 - - Reticuline oxidase precursor, putative [Ricinus communis]
7 Hb_135392_010 0.0726009372 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
8 Hb_000352_080 0.0733974085 - - PREDICTED: lipid transfer-like protein VAS [Jatropha curcas]
9 Hb_000155_140 0.0797630745 - - o-methyltransferase, putative [Ricinus communis]
10 Hb_004097_080 0.0824530245 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X1 [Nicotiana tomentosiformis]
11 Hb_001464_010 0.0846833582 - - PREDICTED: putative receptor-like protein kinase At4g00960 isoform X1 [Populus euphratica]
12 Hb_007527_020 0.0862376496 - - PREDICTED: feruloyl CoA ortho-hydroxylase 1 [Jatropha curcas]
13 Hb_039562_010 0.0915978884 - - PREDICTED: protein SRG1-like [Jatropha curcas]
14 Hb_000281_200 0.0952920726 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
15 Hb_000503_040 0.0953911878 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
16 Hb_007483_040 0.0958776381 - - PREDICTED: protein SRG1-like [Jatropha curcas]
17 Hb_004204_160 0.0960041823 - - S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis]
18 Hb_001288_010 0.097169284 - - -
19 Hb_007532_050 0.0977874121 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
20 Hb_039655_010 0.0979839132 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Malus domestica]

Gene co-expression network

sample Hb_001134_040 Hb_001134_040 Hb_002805_230 Hb_002805_230 Hb_001134_040--Hb_002805_230 Hb_058620_010 Hb_058620_010 Hb_001134_040--Hb_058620_010 Hb_003090_070 Hb_003090_070 Hb_001134_040--Hb_003090_070 Hb_000712_070 Hb_000712_070 Hb_001134_040--Hb_000712_070 Hb_007417_020 Hb_007417_020 Hb_001134_040--Hb_007417_020 Hb_135392_010 Hb_135392_010 Hb_001134_040--Hb_135392_010 Hb_002805_230--Hb_003090_070 Hb_002805_230--Hb_000712_070 Hb_007532_050 Hb_007532_050 Hb_002805_230--Hb_007532_050 Hb_002805_230--Hb_058620_010 Hb_004693_010 Hb_004693_010 Hb_002805_230--Hb_004693_010 Hb_058620_010--Hb_000712_070 Hb_004097_080 Hb_004097_080 Hb_058620_010--Hb_004097_080 Hb_058620_010--Hb_135392_010 Hb_058620_010--Hb_003090_070 Hb_003090_070--Hb_000712_070 Hb_003090_070--Hb_004693_010 Hb_000059_100 Hb_000059_100 Hb_003090_070--Hb_000059_100 Hb_003090_070--Hb_007532_050 Hb_000141_070 Hb_000141_070 Hb_000712_070--Hb_000141_070 Hb_003334_080 Hb_003334_080 Hb_000712_070--Hb_003334_080 Hb_000712_070--Hb_004693_010 Hb_007483_040 Hb_007483_040 Hb_000712_070--Hb_007483_040 Hb_001464_010 Hb_001464_010 Hb_007417_020--Hb_001464_010 Hb_007417_020--Hb_135392_010 Hb_007491_010 Hb_007491_010 Hb_007417_020--Hb_007491_010 Hb_007417_020--Hb_003090_070 Hb_007417_020--Hb_002805_230 Hb_135392_010--Hb_007491_010 Hb_135392_010--Hb_001464_010 Hb_135392_010--Hb_004097_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.152599 13.041 10.3527 9.09734 0.0358164 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0882759 0.277558 0 347.84 5.71771

CAGE analysis