Hb_001135_270

Information

Type -
Description -
Location Contig1135: 338767-341445
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001135_270 0.0 - - -
2 Hb_005799_030 0.0177257677 - - PREDICTED: uncharacterized protein LOC103926623 [Pyrus x bretschneideri]
3 Hb_081636_010 0.0488822281 - - -
4 Hb_001584_230 0.0775629572 - - invertase/pectin methylesterase inhibitor family protein [Populus trichocarpa]
5 Hb_067345_050 0.1312805643 - - PREDICTED: uncharacterized protein LOC104107076 [Nicotiana tomentosiformis]
6 Hb_000123_390 0.1320458525 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001899_010 0.1351933589 - - PREDICTED: probable ubiquitin conjugation factor E4 isoform X2 [Jatropha curcas]
8 Hb_179763_010 0.1425967254 - - -
9 Hb_003529_210 0.1591471706 - - -
10 Hb_066784_020 0.1612014574 - - conserved hypothetical protein [Ricinus communis]
11 Hb_114868_010 0.1765545203 - - -
12 Hb_029866_010 0.1827565915 - - -
13 Hb_013983_010 0.1863626468 - - hypothetical protein PRUPE_ppa016763mg, partial [Prunus persica]
14 Hb_000345_480 0.212009509 - - cyclin-dependent protein kinase, putative [Ricinus communis]
15 Hb_003529_220 0.216399675 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00222 [Jatropha curcas]
16 Hb_001159_210 0.2175545748 - - PREDICTED: MATE efflux family protein DTX1 [Jatropha curcas]
17 Hb_009686_010 0.2185819929 - - mitochondrial thioredoxin 2 [Hevea brasiliensis]
18 Hb_005116_020 0.2214599699 - - PREDICTED: DNA repair helicase UVH6 isoform X2 [Sesamum indicum]
19 Hb_003494_260 0.2269803439 - - -
20 Hb_075570_010 0.2321141379 - - -

Gene co-expression network

sample Hb_001135_270 Hb_001135_270 Hb_005799_030 Hb_005799_030 Hb_001135_270--Hb_005799_030 Hb_081636_010 Hb_081636_010 Hb_001135_270--Hb_081636_010 Hb_001584_230 Hb_001584_230 Hb_001135_270--Hb_001584_230 Hb_067345_050 Hb_067345_050 Hb_001135_270--Hb_067345_050 Hb_000123_390 Hb_000123_390 Hb_001135_270--Hb_000123_390 Hb_001899_010 Hb_001899_010 Hb_001135_270--Hb_001899_010 Hb_005799_030--Hb_081636_010 Hb_005799_030--Hb_001584_230 Hb_005799_030--Hb_000123_390 Hb_005799_030--Hb_001899_010 Hb_179763_010 Hb_179763_010 Hb_005799_030--Hb_179763_010 Hb_081636_010--Hb_001584_230 Hb_013983_010 Hb_013983_010 Hb_081636_010--Hb_013983_010 Hb_081636_010--Hb_067345_050 Hb_029866_010 Hb_029866_010 Hb_081636_010--Hb_029866_010 Hb_001584_230--Hb_000123_390 Hb_001584_230--Hb_029866_010 Hb_001584_230--Hb_001899_010 Hb_066784_020 Hb_066784_020 Hb_067345_050--Hb_066784_020 Hb_003529_210 Hb_003529_210 Hb_067345_050--Hb_003529_210 Hb_067345_050--Hb_005799_030 Hb_182310_010 Hb_182310_010 Hb_067345_050--Hb_182310_010 Hb_000123_390--Hb_081636_010 Hb_000123_390--Hb_001899_010 Hb_000123_390--Hb_179763_010 Hb_001899_010--Hb_003529_210 Hb_001899_010--Hb_179763_010 Hb_003529_220 Hb_003529_220 Hb_001899_010--Hb_003529_220 Hb_001899_010--Hb_066784_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0236977 0 0 0 0.093553 0.0684776
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis