Hb_001135_290

Information

Type -
Description -
Location Contig1135: 348563-348814
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP46147.1
description hypothetical protein JCGZ_06658 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LCL2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06658 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04059: 348297-348770
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001135_290 0.0 - - hypothetical protein JCGZ_06658 [Jatropha curcas]
2 Hb_019229_020 0.108268986 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
3 Hb_000616_050 0.121940362 - - PREDICTED: uncharacterized protein LOC105639906 [Jatropha curcas]
4 Hb_001838_050 0.1252835326 - - hypothetical protein B456_007G218500 [Gossypium raimondii]
5 Hb_003399_030 0.1278279794 - - PREDICTED: isoflavone 2'-hydroxylase-like [Jatropha curcas]
6 Hb_001104_280 0.134399722 - - PREDICTED: UPF0481 protein At3g47200 [Jatropha curcas]
7 Hb_001638_110 0.1348175485 - - conserved hypothetical protein [Ricinus communis]
8 Hb_088916_010 0.1368224161 - - PREDICTED: receptor-like serine/threonine-protein kinase At4g25390 [Jatropha curcas]
9 Hb_000237_150 0.1369504287 - - Epoxide hydrolase 2 [Morus notabilis]
10 Hb_000852_050 0.1442173882 - - hypothetical protein POPTR_0018s02450g [Populus trichocarpa]
11 Hb_002007_140 0.1451144486 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein NUTCRACKER-like [Populus euphratica]
12 Hb_012395_070 0.1453392891 - - PREDICTED: probable metal-nicotianamine transporter YSL6 [Jatropha curcas]
13 Hb_000649_030 0.1462596015 - - scab resistance family protein [Populus trichocarpa]
14 Hb_000000_060 0.1472559174 - - PREDICTED: wall-associated receptor kinase-like 14 [Jatropha curcas]
15 Hb_012019_020 0.1473816111 - - Nonspecific lipid-transfer protein precursor, putative [Ricinus communis]
16 Hb_142332_010 0.1497930457 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
17 Hb_003031_030 0.1504401736 - - hypothetical protein JCGZ_21288 [Jatropha curcas]
18 Hb_005797_030 0.1520808155 - - PREDICTED: MATE efflux family protein LAL5-like [Jatropha curcas]
19 Hb_055305_010 0.1544066061 - - Disease resistance protein RFL1, putative [Ricinus communis]
20 Hb_000265_010 0.1548565673 - - amino acid transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_001135_290 Hb_001135_290 Hb_019229_020 Hb_019229_020 Hb_001135_290--Hb_019229_020 Hb_000616_050 Hb_000616_050 Hb_001135_290--Hb_000616_050 Hb_001838_050 Hb_001838_050 Hb_001135_290--Hb_001838_050 Hb_003399_030 Hb_003399_030 Hb_001135_290--Hb_003399_030 Hb_001104_280 Hb_001104_280 Hb_001135_290--Hb_001104_280 Hb_001638_110 Hb_001638_110 Hb_001135_290--Hb_001638_110 Hb_019229_020--Hb_001638_110 Hb_019229_020--Hb_000616_050 Hb_019229_020--Hb_001104_280 Hb_000649_030 Hb_000649_030 Hb_019229_020--Hb_000649_030 Hb_000000_060 Hb_000000_060 Hb_019229_020--Hb_000000_060 Hb_000237_150 Hb_000237_150 Hb_019229_020--Hb_000237_150 Hb_000616_050--Hb_000237_150 Hb_003031_030 Hb_003031_030 Hb_000616_050--Hb_003031_030 Hb_000616_050--Hb_000649_030 Hb_000616_050--Hb_001838_050 Hb_000852_050 Hb_000852_050 Hb_000616_050--Hb_000852_050 Hb_004574_010 Hb_004574_010 Hb_001838_050--Hb_004574_010 Hb_001838_050--Hb_003031_030 Hb_001838_050--Hb_000237_150 Hb_088916_010 Hb_088916_010 Hb_001838_050--Hb_088916_010 Hb_001693_020 Hb_001693_020 Hb_001838_050--Hb_001693_020 Hb_003399_030--Hb_001838_050 Hb_000984_080 Hb_000984_080 Hb_003399_030--Hb_000984_080 Hb_003399_030--Hb_088916_010 Hb_002960_170 Hb_002960_170 Hb_003399_030--Hb_002960_170 Hb_001678_030 Hb_001678_030 Hb_003399_030--Hb_001678_030 Hb_001104_280--Hb_000000_060 Hb_005489_160 Hb_005489_160 Hb_001104_280--Hb_005489_160 Hb_005797_030 Hb_005797_030 Hb_001104_280--Hb_005797_030 Hb_012395_070 Hb_012395_070 Hb_001104_280--Hb_012395_070 Hb_002007_140 Hb_002007_140 Hb_001104_280--Hb_002007_140 Hb_000238_060 Hb_000238_060 Hb_001638_110--Hb_000238_060 Hb_005228_170 Hb_005228_170 Hb_001638_110--Hb_005228_170 Hb_002671_110 Hb_002671_110 Hb_001638_110--Hb_002671_110 Hb_001638_110--Hb_000852_050 Hb_001638_110--Hb_000649_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 6.46785 0.499775 2.24048 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.484281 0 11.3588 0.66384

CAGE analysis