Hb_001136_110

Information

Type transcription factor
Description TF Family: bZIP
Location Contig1136: 119806-124708
Sequence    

Annotation

kegg
ID rcu:RCOM_0353720
description Transcription factor HBP-1b(c1), putative
nr
ID XP_012082054.1
description PREDICTED: transcription factor HBP-1b(c38) isoform X1 [Jatropha curcas]
swissprot
ID Q9SX27
description Transcription factor PERIANTHIA OS=Arabidopsis thaliana GN=PAN PE=1 SV=1
trembl
ID A0A067KAU1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18301 PE=4 SV=1
Gene Ontology
ID GO:0003700
description transcription factor hbp-1b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001136_110 0.0 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1b(c38) isoform X1 [Jatropha curcas]
2 Hb_012508_040 0.1279292486 - - hypothetical protein POPTR_0006s08460g [Populus trichocarpa]
3 Hb_001439_170 0.1402008773 - - PREDICTED: pectinesterase 31-like isoform X2 [Jatropha curcas]
4 Hb_006501_110 0.1446709629 - - PREDICTED: probable 2-oxoglutarate-dependent dioxygenase At3g49630 isoform X1 [Jatropha curcas]
5 Hb_002735_060 0.15715347 - - PREDICTED: desumoylating isopeptidase 1 [Jatropha curcas]
6 Hb_000733_070 0.1642864824 - - PREDICTED: rop guanine nucleotide exchange factor 5 [Jatropha curcas]
7 Hb_000041_080 0.1646258851 - - PREDICTED: universal stress protein A-like protein [Jatropha curcas]
8 Hb_002539_080 0.1676456085 - - PREDICTED: triose phosphate/phosphate translocator, chloroplastic-like [Jatropha curcas]
9 Hb_004787_090 0.1688073884 - - PREDICTED: HVA22-like protein a [Jatropha curcas]
10 Hb_001863_480 0.1754905877 - - PREDICTED: uncharacterized protein LOC105630612 [Jatropha curcas]
11 Hb_114893_020 0.1769626007 - - ankyrin repeat-containing protein, putative [Ricinus communis]
12 Hb_000096_090 0.1789082678 - - hypothetical protein JCGZ_12551 [Jatropha curcas]
13 Hb_002447_030 0.1793934822 - - PREDICTED: cytochrome b5 domain-containing protein RLF [Jatropha curcas]
14 Hb_004738_010 0.1807954575 - - PREDICTED: N-acetyl-D-glucosamine kinase-like [Jatropha curcas]
15 Hb_000419_040 0.1819767942 - - chorismate synthase [Hevea brasiliensis]
16 Hb_000331_440 0.182066538 - - hypothetical protein POPTR_0015s10290g [Populus trichocarpa]
17 Hb_034299_060 0.1830721491 transcription factor TF Family: Orphans PREDICTED: two-component response regulator ARR5 [Jatropha curcas]
18 Hb_017124_010 0.1833709457 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002681_110 0.1837799361 - - PREDICTED: uncharacterized protein LOC105633759 [Jatropha curcas]
20 Hb_004659_120 0.1852397762 rubber biosynthesis Gene Name: CPTL PREDICTED: dehydrodolichyl diphosphate syntase complex subunit NUS1 isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_001136_110 Hb_001136_110 Hb_012508_040 Hb_012508_040 Hb_001136_110--Hb_012508_040 Hb_001439_170 Hb_001439_170 Hb_001136_110--Hb_001439_170 Hb_006501_110 Hb_006501_110 Hb_001136_110--Hb_006501_110 Hb_002735_060 Hb_002735_060 Hb_001136_110--Hb_002735_060 Hb_000733_070 Hb_000733_070 Hb_001136_110--Hb_000733_070 Hb_000041_080 Hb_000041_080 Hb_001136_110--Hb_000041_080 Hb_017124_010 Hb_017124_010 Hb_012508_040--Hb_017124_010 Hb_005918_030 Hb_005918_030 Hb_012508_040--Hb_005918_030 Hb_012508_040--Hb_001439_170 Hb_002539_080 Hb_002539_080 Hb_012508_040--Hb_002539_080 Hb_000419_040 Hb_000419_040 Hb_012508_040--Hb_000419_040 Hb_000012_130 Hb_000012_130 Hb_001439_170--Hb_000012_130 Hb_001711_030 Hb_001711_030 Hb_001439_170--Hb_001711_030 Hb_001863_480 Hb_001863_480 Hb_001439_170--Hb_001863_480 Hb_002119_120 Hb_002119_120 Hb_001439_170--Hb_002119_120 Hb_044662_070 Hb_044662_070 Hb_001439_170--Hb_044662_070 Hb_001439_170--Hb_002539_080 Hb_000481_020 Hb_000481_020 Hb_006501_110--Hb_000481_020 Hb_004787_090 Hb_004787_090 Hb_006501_110--Hb_004787_090 Hb_000982_070 Hb_000982_070 Hb_006501_110--Hb_000982_070 Hb_000390_200 Hb_000390_200 Hb_006501_110--Hb_000390_200 Hb_004659_120 Hb_004659_120 Hb_006501_110--Hb_004659_120 Hb_000723_090 Hb_000723_090 Hb_006501_110--Hb_000723_090 Hb_157022_020 Hb_157022_020 Hb_002735_060--Hb_157022_020 Hb_002735_060--Hb_002539_080 Hb_162275_030 Hb_162275_030 Hb_002735_060--Hb_162275_030 Hb_092100_020 Hb_092100_020 Hb_002735_060--Hb_092100_020 Hb_002735_060--Hb_001863_480 Hb_002716_070 Hb_002716_070 Hb_002735_060--Hb_002716_070 Hb_000127_010 Hb_000127_010 Hb_000733_070--Hb_000127_010 Hb_000264_240 Hb_000264_240 Hb_000733_070--Hb_000264_240 Hb_003732_020 Hb_003732_020 Hb_000733_070--Hb_003732_020 Hb_000733_070--Hb_000041_080 Hb_001360_040 Hb_001360_040 Hb_000733_070--Hb_001360_040 Hb_000096_090 Hb_000096_090 Hb_000733_070--Hb_000096_090 Hb_000412_110 Hb_000412_110 Hb_000041_080--Hb_000412_110 Hb_000023_230 Hb_000023_230 Hb_000041_080--Hb_000023_230 Hb_002529_100 Hb_002529_100 Hb_000041_080--Hb_002529_100 Hb_003540_040 Hb_003540_040 Hb_000041_080--Hb_003540_040 Hb_002681_020 Hb_002681_020 Hb_000041_080--Hb_002681_020 Hb_000676_220 Hb_000676_220 Hb_000041_080--Hb_000676_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.96216 0.184672 0.571426 0.688976 2.00881 0.680786
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.86493 1.31217 2.25141 0.229457 0.284785

CAGE analysis