Hb_001141_110

Information

Type -
Description -
Location Contig1141: 112695-113636
Sequence    

Annotation

kegg
ID cit:102616833
description uncharacterized LOC102616833
nr
ID KDP40208.1
description hypothetical protein JCGZ_02206 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZ57
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02206 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001141_110 0.0 - - hypothetical protein JCGZ_02206 [Jatropha curcas]
2 Hb_004129_160 0.1486329324 - - small heat-shock protein, putative [Ricinus communis]
3 Hb_005656_190 0.156447789 - - proteasome subunit beta type 6,9, putative [Ricinus communis]
4 Hb_001369_600 0.1756979447 - - kinase, putative [Ricinus communis]
5 Hb_000200_200 0.198615489 - - PREDICTED: putative zinc finger protein At1g68190 isoform X2 [Jatropha curcas]
6 Hb_003007_010 0.2024500991 - - PREDICTED: probable peptide/nitrate transporter At3g43790 isoform X1 [Populus euphratica]
7 Hb_007254_080 0.2075017083 - - -
8 Hb_147752_010 0.2081807571 - - PREDICTED: 40S ribosomal protein S9-2-like isoform X1 [Populus euphratica]
9 Hb_001488_370 0.2133050125 - - Esterase PIR7B, putative [Ricinus communis]
10 Hb_003540_200 0.2177411184 - - PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Jatropha curcas]
11 Hb_117807_010 0.2179249356 - - PREDICTED: uncharacterized protein LOC105635720 [Jatropha curcas]
12 Hb_009974_020 0.2245456983 - - PREDICTED: uncharacterized protein LOC104427753 [Eucalyptus grandis]
13 Hb_116420_020 0.2249881962 - - Phytosulfokines 3 precursor family protein [Populus trichocarpa]
14 Hb_003181_050 0.2250045283 - - PREDICTED: DNA replication complex GINS protein PSF2 [Jatropha curcas]
15 Hb_002026_120 0.2294293764 - - hypothetical protein CISIN_1g025276mg [Citrus sinensis]
16 Hb_000045_210 0.230217084 - - -
17 Hb_000340_500 0.2306493419 - - PREDICTED: aldo-keto reductase-like [Jatropha curcas]
18 Hb_023344_050 0.2307044533 - - PREDICTED: uncharacterized protein LOC105644474 [Jatropha curcas]
19 Hb_012053_050 0.232548639 - - PREDICTED: UDP-D-apiose/UDP-D-xylose synthase 2 [Jatropha curcas]
20 Hb_000979_250 0.2330545359 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001141_110 Hb_001141_110 Hb_004129_160 Hb_004129_160 Hb_001141_110--Hb_004129_160 Hb_005656_190 Hb_005656_190 Hb_001141_110--Hb_005656_190 Hb_001369_600 Hb_001369_600 Hb_001141_110--Hb_001369_600 Hb_000200_200 Hb_000200_200 Hb_001141_110--Hb_000200_200 Hb_003007_010 Hb_003007_010 Hb_001141_110--Hb_003007_010 Hb_007254_080 Hb_007254_080 Hb_001141_110--Hb_007254_080 Hb_004679_060 Hb_004679_060 Hb_004129_160--Hb_004679_060 Hb_004129_160--Hb_005656_190 Hb_147752_010 Hb_147752_010 Hb_004129_160--Hb_147752_010 Hb_170426_010 Hb_170426_010 Hb_004129_160--Hb_170426_010 Hb_000045_210 Hb_000045_210 Hb_004129_160--Hb_000045_210 Hb_005656_190--Hb_000200_200 Hb_000340_500 Hb_000340_500 Hb_005656_190--Hb_000340_500 Hb_000167_030 Hb_000167_030 Hb_005656_190--Hb_000167_030 Hb_009778_040 Hb_009778_040 Hb_005656_190--Hb_009778_040 Hb_003181_050 Hb_003181_050 Hb_005656_190--Hb_003181_050 Hb_002067_140 Hb_002067_140 Hb_001369_600--Hb_002067_140 Hb_012053_050 Hb_012053_050 Hb_001369_600--Hb_012053_050 Hb_001776_170 Hb_001776_170 Hb_001369_600--Hb_001776_170 Hb_001488_370 Hb_001488_370 Hb_001369_600--Hb_001488_370 Hb_007426_050 Hb_007426_050 Hb_001369_600--Hb_007426_050 Hb_000589_160 Hb_000589_160 Hb_001369_600--Hb_000589_160 Hb_000200_200--Hb_000340_500 Hb_189216_030 Hb_189216_030 Hb_000200_200--Hb_189216_030 Hb_000130_450 Hb_000130_450 Hb_000200_200--Hb_000130_450 Hb_185224_010 Hb_185224_010 Hb_000200_200--Hb_185224_010 Hb_001959_010 Hb_001959_010 Hb_000200_200--Hb_001959_010 Hb_141194_010 Hb_141194_010 Hb_003007_010--Hb_141194_010 Hb_000483_090 Hb_000483_090 Hb_003007_010--Hb_000483_090 Hb_003007_010--Hb_000045_210 Hb_116420_020 Hb_116420_020 Hb_003007_010--Hb_116420_020 Hb_003007_010--Hb_007254_080 Hb_000592_060 Hb_000592_060 Hb_003007_010--Hb_000592_060 Hb_000110_170 Hb_000110_170 Hb_007254_080--Hb_000110_170 Hb_004545_130 Hb_004545_130 Hb_007254_080--Hb_004545_130 Hb_002243_060 Hb_002243_060 Hb_007254_080--Hb_002243_060 Hb_004567_020 Hb_004567_020 Hb_007254_080--Hb_004567_020 Hb_005000_180 Hb_005000_180 Hb_007254_080--Hb_005000_180 Hb_007254_080--Hb_147752_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0731796 0.0980276 0.909256 0.34274 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.07019 3.15284 1.78115 0.436813 0.196558

CAGE analysis