Hb_001141_160

Information

Type -
Description -
Location Contig1141: 127926-130474
Sequence    

Annotation

kegg
ID rcu:RCOM_0911690
description sugar transporter, putative (EC:1.3.1.74)
nr
ID XP_012069672.1
description PREDICTED: sugar transport protein 14-like [Jatropha curcas]
swissprot
ID Q8GW61
description Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2
trembl
ID A0A067L823
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02202 PE=3 SV=1
Gene Ontology
ID GO:0005886
description sugar transport protein 14-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04243: 127873-130481
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001141_160 0.0 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
2 Hb_059000_010 0.0393204364 - - hypothetical protein JCGZ_17736 [Jatropha curcas]
3 Hb_004122_060 0.0905458214 - - PREDICTED: uncharacterized acetyltransferase At3g50280-like [Jatropha curcas]
4 Hb_000946_050 0.0942321944 - - cytochrome P450, putative [Ricinus communis]
5 Hb_000398_140 0.0974256939 - - PREDICTED: methionine S-methyltransferase [Jatropha curcas]
6 Hb_030982_050 0.0975195756 - - PREDICTED: gamma-glutamyl hydrolase 2-like [Jatropha curcas]
7 Hb_001544_070 0.1006873527 - - PREDICTED: multicopper oxidase LPR1 [Jatropha curcas]
8 Hb_014250_010 0.1018049667 - - PREDICTED: alpha-mannosidase-like isoform X2 [Populus euphratica]
9 Hb_000120_320 0.1034145151 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_009554_030 0.1050864934 - - PREDICTED: chlorophyll synthase, chloroplastic [Prunus mume]
11 Hb_003656_090 0.1056767397 - - PREDICTED: protein Brevis radix-like 4 [Jatropha curcas]
12 Hb_012787_060 0.107551344 - - PREDICTED: glutathione S-transferase U17-like [Prunus mume]
13 Hb_000594_160 0.1077970754 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 8 [Jatropha curcas]
14 Hb_002641_140 0.109907694 - - protein phosphatase 2c, putative [Ricinus communis]
15 Hb_000096_210 0.1112000674 - - PREDICTED: probable carboxylesterase 7 [Jatropha curcas]
16 Hb_001638_150 0.1112553764 - - acyltransferase, putative [Ricinus communis]
17 Hb_014967_020 0.1124801269 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
18 Hb_015001_030 0.1138192836 - - inosine-uridine preferring nucleoside hydrolase family protein [Populus trichocarpa]
19 Hb_000342_020 0.1158271383 - - bel1 homeotic protein, putative [Ricinus communis]
20 Hb_000092_030 0.1161844508 - - PREDICTED: uncharacterized protein LOC105111213 [Populus euphratica]

Gene co-expression network

sample Hb_001141_160 Hb_001141_160 Hb_059000_010 Hb_059000_010 Hb_001141_160--Hb_059000_010 Hb_004122_060 Hb_004122_060 Hb_001141_160--Hb_004122_060 Hb_000946_050 Hb_000946_050 Hb_001141_160--Hb_000946_050 Hb_000398_140 Hb_000398_140 Hb_001141_160--Hb_000398_140 Hb_030982_050 Hb_030982_050 Hb_001141_160--Hb_030982_050 Hb_001544_070 Hb_001544_070 Hb_001141_160--Hb_001544_070 Hb_059000_010--Hb_004122_060 Hb_009554_030 Hb_009554_030 Hb_059000_010--Hb_009554_030 Hb_059000_010--Hb_000946_050 Hb_059000_010--Hb_001544_070 Hb_014250_010 Hb_014250_010 Hb_059000_010--Hb_014250_010 Hb_004122_060--Hb_009554_030 Hb_004122_060--Hb_001544_070 Hb_004122_060--Hb_000946_050 Hb_000092_030 Hb_000092_030 Hb_004122_060--Hb_000092_030 Hb_000946_050--Hb_000092_030 Hb_000096_210 Hb_000096_210 Hb_000946_050--Hb_000096_210 Hb_002450_180 Hb_002450_180 Hb_000946_050--Hb_002450_180 Hb_004421_010 Hb_004421_010 Hb_000398_140--Hb_004421_010 Hb_000398_140--Hb_059000_010 Hb_001189_100 Hb_001189_100 Hb_000398_140--Hb_001189_100 Hb_000398_140--Hb_004122_060 Hb_012743_020 Hb_012743_020 Hb_000398_140--Hb_012743_020 Hb_006970_170 Hb_006970_170 Hb_030982_050--Hb_006970_170 Hb_106089_010 Hb_106089_010 Hb_030982_050--Hb_106089_010 Hb_142026_010 Hb_142026_010 Hb_030982_050--Hb_142026_010 Hb_000163_180 Hb_000163_180 Hb_030982_050--Hb_000163_180 Hb_000046_430 Hb_000046_430 Hb_030982_050--Hb_000046_430 Hb_174101_010 Hb_174101_010 Hb_001544_070--Hb_174101_010 Hb_001174_030 Hb_001174_030 Hb_001544_070--Hb_001174_030 Hb_000472_020 Hb_000472_020 Hb_001544_070--Hb_000472_020 Hb_001544_070--Hb_000092_030 Hb_001706_020 Hb_001706_020 Hb_001544_070--Hb_001706_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0116289 4.5405 6.28036 9.07011 0 0.0113898
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 6.36964 5.1674

CAGE analysis