Hb_001141_170

Information

Type -
Description -
Location Contig1141: 133327-134416
Sequence    

Annotation

kegg
ID rcu:RCOM_0911710
description lipid binding protein, putative
nr
ID XP_012069671.1
description PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZ52
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02201 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04244: 133413-134258
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001141_170 0.0 - - PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
2 Hb_012019_030 0.0572723162 - - hypothetical protein POPTR_0005s23360g [Populus trichocarpa]
3 Hb_001114_300 0.0577508797 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
4 Hb_010712_020 0.0630591312 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
5 Hb_004195_040 0.0666727908 - - salicylic acid methyl transferase [Capsicum annuum]
6 Hb_000859_040 0.0682235894 - - Early nodulin 16 precursor, putative [Ricinus communis]
7 Hb_011824_010 0.0696234875 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
8 Hb_002281_070 0.0757902097 - - hypothetical protein JCGZ_04352 [Jatropha curcas]
9 Hb_000905_140 0.0763745739 - - PREDICTED: protein gamma response 1 isoform X2 [Jatropha curcas]
10 Hb_007810_140 0.0773404172 - - Ankyrin repeat-containing protein [Medicago truncatula]
11 Hb_000160_230 0.0773841641 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
12 Hb_000329_410 0.0777606328 - - Beta-expansin 3 precursor, putative [Ricinus communis]
13 Hb_001080_310 0.0815293659 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
14 Hb_002311_050 0.0835053182 - - PREDICTED: uncharacterized protein LOC105122837 isoform X2 [Populus euphratica]
15 Hb_064398_010 0.0842709101 - - cytochrome P450, putative [Ricinus communis]
16 Hb_005731_080 0.0893602531 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
17 Hb_139460_010 0.0906708506 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
18 Hb_006478_190 0.0928074897 - - lipid binding protein, putative [Ricinus communis]
19 Hb_001863_290 0.0937854573 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
20 Hb_004185_040 0.0946512947 - - polygalacturonase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001141_170 Hb_001141_170 Hb_012019_030 Hb_012019_030 Hb_001141_170--Hb_012019_030 Hb_001114_300 Hb_001114_300 Hb_001141_170--Hb_001114_300 Hb_010712_020 Hb_010712_020 Hb_001141_170--Hb_010712_020 Hb_004195_040 Hb_004195_040 Hb_001141_170--Hb_004195_040 Hb_000859_040 Hb_000859_040 Hb_001141_170--Hb_000859_040 Hb_011824_010 Hb_011824_010 Hb_001141_170--Hb_011824_010 Hb_012019_030--Hb_004195_040 Hb_004185_040 Hb_004185_040 Hb_012019_030--Hb_004185_040 Hb_012019_030--Hb_001114_300 Hb_006478_190 Hb_006478_190 Hb_012019_030--Hb_006478_190 Hb_005731_080 Hb_005731_080 Hb_012019_030--Hb_005731_080 Hb_000905_140 Hb_000905_140 Hb_001114_300--Hb_000905_140 Hb_000329_410 Hb_000329_410 Hb_001114_300--Hb_000329_410 Hb_001114_300--Hb_000859_040 Hb_169426_010 Hb_169426_010 Hb_001114_300--Hb_169426_010 Hb_005780_010 Hb_005780_010 Hb_001114_300--Hb_005780_010 Hb_010712_020--Hb_011824_010 Hb_001863_290 Hb_001863_290 Hb_010712_020--Hb_001863_290 Hb_000160_230 Hb_000160_230 Hb_010712_020--Hb_000160_230 Hb_007810_140 Hb_007810_140 Hb_010712_020--Hb_007810_140 Hb_064398_010 Hb_064398_010 Hb_010712_020--Hb_064398_010 Hb_004195_040--Hb_004185_040 Hb_139460_010 Hb_139460_010 Hb_004195_040--Hb_139460_010 Hb_000813_120 Hb_000813_120 Hb_004195_040--Hb_000813_120 Hb_004195_040--Hb_005731_080 Hb_000859_040--Hb_007810_140 Hb_000859_040--Hb_000160_230 Hb_001410_090 Hb_001410_090 Hb_000859_040--Hb_001410_090 Hb_002615_050 Hb_002615_050 Hb_000859_040--Hb_002615_050 Hb_006196_020 Hb_006196_020 Hb_000859_040--Hb_006196_020 Hb_011824_010--Hb_139460_010 Hb_011824_010--Hb_001863_290 Hb_107258_010 Hb_107258_010 Hb_011824_010--Hb_107258_010 Hb_011856_010 Hb_011856_010 Hb_011824_010--Hb_011856_010 Hb_011824_010--Hb_002615_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.89964 0.0756646 0.372783 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 22.9176 0.114032

CAGE analysis