Hb_001141_190

Information

Type -
Description -
Location Contig1141: 138915-140406
Sequence    

Annotation

kegg
ID rcu:RCOM_0911750
description hypothetical protein
nr
ID XP_002517109.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9LJ87
description Hsp90 co-chaperone CDC37 OS=Arabidopsis thaliana GN=CDC37 PE=1 SV=1
trembl
ID B9RTP0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0911750 PE=4 SV=1
Gene Ontology
ID GO:0005634
description parafibromin-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001141_190 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000177_130 0.1557530267 - - wall-associated kinase, putative [Ricinus communis]
3 Hb_003077_060 0.1639000334 - - PREDICTED: 3-oxo-Delta(4,5)-steroid 5-beta-reductase-like [Jatropha curcas]
4 Hb_003529_230 0.1725172699 transcription factor TF Family: ERF -
5 Hb_004880_100 0.172630569 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300-like [Glycine max]
6 Hb_007416_170 0.1766896542 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 17 [Jatropha curcas]
7 Hb_092458_010 0.1779606744 - - calmodulin binding protein, putative [Ricinus communis]
8 Hb_006040_070 0.1870877216 - - orf107b gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
9 Hb_052434_010 0.1879238047 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 [Sesamum indicum]
10 Hb_001538_050 0.1880740952 - - PREDICTED: TMV resistance protein N-like [Populus euphratica]
11 Hb_000771_070 0.1908923014 - - PREDICTED: plastidial pyruvate kinase 4, chloroplastic [Jatropha curcas]
12 Hb_002107_110 0.1919770974 - - PREDICTED: probable cinnamyl alcohol dehydrogenase 6 isoform X1 [Jatropha curcas]
13 Hb_000027_130 0.1959458116 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
14 Hb_000402_030 0.1979773636 - - PREDICTED: cysteine-rich receptor-like protein kinase 2 [Jatropha curcas]
15 Hb_077995_010 0.2017910982 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
16 Hb_002010_020 0.2033790412 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 2-like [Jatropha curcas]
17 Hb_003599_020 0.2066151617 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
18 Hb_033045_010 0.2067701427 - - copine, putative [Ricinus communis]
19 Hb_000237_070 0.2068291069 - - Purple acid phosphatase precursor, putative [Ricinus communis]
20 Hb_005814_010 0.2071782723 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001141_190 Hb_001141_190 Hb_000177_130 Hb_000177_130 Hb_001141_190--Hb_000177_130 Hb_003077_060 Hb_003077_060 Hb_001141_190--Hb_003077_060 Hb_003529_230 Hb_003529_230 Hb_001141_190--Hb_003529_230 Hb_004880_100 Hb_004880_100 Hb_001141_190--Hb_004880_100 Hb_007416_170 Hb_007416_170 Hb_001141_190--Hb_007416_170 Hb_092458_010 Hb_092458_010 Hb_001141_190--Hb_092458_010 Hb_000177_130--Hb_004880_100 Hb_000002_100 Hb_000002_100 Hb_000177_130--Hb_000002_100 Hb_000177_130--Hb_003077_060 Hb_000412_090 Hb_000412_090 Hb_000177_130--Hb_000412_090 Hb_000705_130 Hb_000705_130 Hb_000177_130--Hb_000705_130 Hb_002890_320 Hb_002890_320 Hb_000177_130--Hb_002890_320 Hb_002107_110 Hb_002107_110 Hb_003077_060--Hb_002107_110 Hb_003077_060--Hb_092458_010 Hb_005867_030 Hb_005867_030 Hb_003077_060--Hb_005867_030 Hb_003077_060--Hb_007416_170 Hb_001619_020 Hb_001619_020 Hb_003077_060--Hb_001619_020 Hb_000237_070 Hb_000237_070 Hb_003077_060--Hb_000237_070 Hb_052434_010 Hb_052434_010 Hb_003529_230--Hb_052434_010 Hb_025236_020 Hb_025236_020 Hb_003529_230--Hb_025236_020 Hb_000771_070 Hb_000771_070 Hb_003529_230--Hb_000771_070 Hb_000402_030 Hb_000402_030 Hb_003529_230--Hb_000402_030 Hb_000752_020 Hb_000752_020 Hb_003529_230--Hb_000752_020 Hb_005814_010 Hb_005814_010 Hb_003529_230--Hb_005814_010 Hb_013720_010 Hb_013720_010 Hb_004880_100--Hb_013720_010 Hb_000331_710 Hb_000331_710 Hb_004880_100--Hb_000331_710 Hb_002010_020 Hb_002010_020 Hb_004880_100--Hb_002010_020 Hb_004880_100--Hb_000002_100 Hb_004880_100--Hb_000705_130 Hb_007416_170--Hb_002890_320 Hb_007416_170--Hb_004880_100 Hb_007416_170--Hb_005867_030 Hb_004837_110 Hb_004837_110 Hb_007416_170--Hb_004837_110 Hb_003029_010 Hb_003029_010 Hb_007416_170--Hb_003029_010 Hb_092458_010--Hb_002107_110 Hb_005433_030 Hb_005433_030 Hb_092458_010--Hb_005433_030 Hb_002615_010 Hb_002615_010 Hb_092458_010--Hb_002615_010 Hb_018633_010 Hb_018633_010 Hb_092458_010--Hb_018633_010 Hb_092458_010--Hb_002010_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.88903 3.12569 0.504352 0 0.428582
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0487064 0 1.37706 1.27895

CAGE analysis