Hb_001141_210

Information

Type transcription factor
Description TF Family: GNAT
Location Contig1141: 141410-141973
Sequence    

Annotation

kegg
ID rcu:RCOM_0911790
description N-acetyltransferase, putative
nr
ID XP_012069663.1
description PREDICTED: uncharacterized protein LOC105632009 [Jatropha curcas]
swissprot
ID P05332
description Uncharacterized N-acetyltransferase p20 OS=Bacillus licheniformis GN=p20 PE=3 SV=1
trembl
ID A0A067KZ38
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02196 PE=4 SV=1
Gene Ontology
ID GO:0008080
description acyl- n-acyltransferases superfamily protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 032_N21.ab1: 141529-142074

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001141_210 0.0 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105632009 [Jatropha curcas]
2 Hb_004785_160 0.1002152111 - - PREDICTED: U-box domain-containing protein 28-like [Jatropha curcas]
3 Hb_002774_180 0.1035549976 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
4 Hb_000031_160 0.10690173 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 17 [Jatropha curcas]
5 Hb_002973_070 0.1110015572 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 40 [Jatropha curcas]
6 Hb_138086_010 0.1157000794 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
7 Hb_070634_010 0.1214977011 - - TMV resistance protein N, putative [Ricinus communis]
8 Hb_000110_030 0.1253382247 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
9 Hb_177215_020 0.1356136372 - - acc synthase, putative [Ricinus communis]
10 Hb_000465_350 0.135679862 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2 [Jatropha curcas]
11 Hb_033053_010 0.139479148 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
12 Hb_001619_020 0.1418409563 - - LRR receptor-like kinase family protein [Medicago truncatula]
13 Hb_000152_170 0.143864562 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Jatropha curcas]
14 Hb_005628_050 0.1443689435 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
15 Hb_023386_060 0.1444191985 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
16 Hb_008806_040 0.1447753013 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
17 Hb_009476_070 0.1459312281 - - PREDICTED: gibberellin 2-beta-dioxygenase 2 [Jatropha curcas]
18 Hb_001971_030 0.1484791582 - - PREDICTED: exonuclease 1 [Jatropha curcas]
19 Hb_002030_180 0.1514541348 - - ring finger protein, putative [Ricinus communis]
20 Hb_002676_110 0.1524261489 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 2-like [Gossypium raimondii]

Gene co-expression network

sample Hb_001141_210 Hb_001141_210 Hb_004785_160 Hb_004785_160 Hb_001141_210--Hb_004785_160 Hb_002774_180 Hb_002774_180 Hb_001141_210--Hb_002774_180 Hb_000031_160 Hb_000031_160 Hb_001141_210--Hb_000031_160 Hb_002973_070 Hb_002973_070 Hb_001141_210--Hb_002973_070 Hb_138086_010 Hb_138086_010 Hb_001141_210--Hb_138086_010 Hb_070634_010 Hb_070634_010 Hb_001141_210--Hb_070634_010 Hb_000110_030 Hb_000110_030 Hb_004785_160--Hb_000110_030 Hb_004785_160--Hb_002973_070 Hb_004544_010 Hb_004544_010 Hb_004785_160--Hb_004544_010 Hb_004785_160--Hb_000031_160 Hb_043522_010 Hb_043522_010 Hb_004785_160--Hb_043522_010 Hb_002774_180--Hb_002973_070 Hb_000018_090 Hb_000018_090 Hb_002774_180--Hb_000018_090 Hb_000771_040 Hb_000771_040 Hb_002774_180--Hb_000771_040 Hb_009476_070 Hb_009476_070 Hb_002774_180--Hb_009476_070 Hb_002774_180--Hb_004785_160 Hb_001619_020 Hb_001619_020 Hb_000031_160--Hb_001619_020 Hb_005628_050 Hb_005628_050 Hb_000031_160--Hb_005628_050 Hb_005814_010 Hb_005814_010 Hb_000031_160--Hb_005814_010 Hb_001635_230 Hb_001635_230 Hb_000031_160--Hb_001635_230 Hb_001971_030 Hb_001971_030 Hb_002973_070--Hb_001971_030 Hb_002973_070--Hb_000031_160 Hb_002973_070--Hb_004544_010 Hb_008406_070 Hb_008406_070 Hb_138086_010--Hb_008406_070 Hb_001198_160 Hb_001198_160 Hb_138086_010--Hb_001198_160 Hb_138086_010--Hb_009476_070 Hb_000152_170 Hb_000152_170 Hb_138086_010--Hb_000152_170 Hb_138086_010--Hb_070634_010 Hb_000365_180 Hb_000365_180 Hb_138086_010--Hb_000365_180 Hb_008806_040 Hb_008806_040 Hb_070634_010--Hb_008806_040 Hb_160653_010 Hb_160653_010 Hb_070634_010--Hb_160653_010 Hb_002676_110 Hb_002676_110 Hb_070634_010--Hb_002676_110 Hb_001430_010 Hb_001430_010 Hb_070634_010--Hb_001430_010 Hb_010721_010 Hb_010721_010 Hb_070634_010--Hb_010721_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.311711 30.9831 35.1275 23.9221 0 0.0850722
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.554348 0.784102 0 13.2003 3.17002

CAGE analysis