Hb_001141_460

Information

Type -
Description -
Location Contig1141: 328744-332448
Sequence    

Annotation

kegg
ID pop:POPTR_0008s15140g
description POPTRDRAFT_657150; heat shock protein 70
nr
ID XP_012069613.1
description PREDICTED: heat shock 70 kDa protein 8 [Jatropha curcas]
swissprot
ID Q9SKY8
description Heat shock 70 kDa protein 8 OS=Arabidopsis thaliana GN=HSP70-8 PE=1 SV=1
trembl
ID A0A067L7W0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02162 PE=3 SV=1
Gene Ontology
ID GO:0005524
description heat shock 70 kda protein 8

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04292: 328782-332367
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001141_460 0.0 - - PREDICTED: heat shock 70 kDa protein 8 [Jatropha curcas]
2 Hb_011798_040 0.1281201615 - - hypothetical protein ZEAMMB73_778895 [Zea mays]
3 Hb_005843_040 0.1325216078 - - PREDICTED: uncharacterized protein LOC105639700 [Jatropha curcas]
4 Hb_000465_480 0.141243337 - - PREDICTED: pentatricopeptide repeat-containing protein At4g16835, mitochondrial [Jatropha curcas]
5 Hb_003236_010 0.1594919903 - - PREDICTED: uncharacterized protein LOC105635957 [Jatropha curcas]
6 Hb_000080_170 0.1618023392 transcription factor TF Family: RWP-RK transcription factor, putative [Ricinus communis]
7 Hb_027073_060 0.163713573 - - PREDICTED: digalactosyldiacylglycerol synthase 1, chloroplastic [Jatropha curcas]
8 Hb_148209_020 0.1694485909 - - PREDICTED: SWI/SNF complex subunit SWI3D isoform X1 [Jatropha curcas]
9 Hb_009558_040 0.1710579745 transcription factor TF Family: MYB hypothetical protein PHAVU_008G102000g [Phaseolus vulgaris]
10 Hb_005946_170 0.1721972238 - - PREDICTED: FRIGIDA-like protein 4a [Jatropha curcas]
11 Hb_018133_030 0.1722765664 - - Heme-binding protein, putative [Ricinus communis]
12 Hb_057451_010 0.1747129162 - - PREDICTED: uncharacterized protein LOC105635588 [Jatropha curcas]
13 Hb_000206_150 0.1750496866 - - unnamed protein product [Coffea canephora]
14 Hb_010578_060 0.1760343647 - - PREDICTED: mediator of RNA polymerase II transcription subunit 14 [Jatropha curcas]
15 Hb_007904_080 0.1787965263 - - hypothetical protein JCGZ_17880 [Jatropha curcas]
16 Hb_000640_200 0.1789946293 - - hypothetical protein RCOM_1346600 [Ricinus communis]
17 Hb_005038_020 0.1792896625 - - WD-repeat protein, putative [Ricinus communis]
18 Hb_001902_060 0.179349428 - - PREDICTED: U-box domain-containing protein 32 isoform X3 [Jatropha curcas]
19 Hb_003866_020 0.1796382094 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000720_070 0.1803062211 transcription factor TF Family: HSF hypothetical protein JCGZ_20639 [Jatropha curcas]

Gene co-expression network

sample Hb_001141_460 Hb_001141_460 Hb_011798_040 Hb_011798_040 Hb_001141_460--Hb_011798_040 Hb_005843_040 Hb_005843_040 Hb_001141_460--Hb_005843_040 Hb_000465_480 Hb_000465_480 Hb_001141_460--Hb_000465_480 Hb_003236_010 Hb_003236_010 Hb_001141_460--Hb_003236_010 Hb_000080_170 Hb_000080_170 Hb_001141_460--Hb_000080_170 Hb_027073_060 Hb_027073_060 Hb_001141_460--Hb_027073_060 Hb_011798_040--Hb_005843_040 Hb_000640_200 Hb_000640_200 Hb_011798_040--Hb_000640_200 Hb_057451_010 Hb_057451_010 Hb_011798_040--Hb_057451_010 Hb_011798_040--Hb_003236_010 Hb_003157_010 Hb_003157_010 Hb_011798_040--Hb_003157_010 Hb_000365_060 Hb_000365_060 Hb_005843_040--Hb_000365_060 Hb_002105_080 Hb_002105_080 Hb_005843_040--Hb_002105_080 Hb_009421_030 Hb_009421_030 Hb_005843_040--Hb_009421_030 Hb_007904_180 Hb_007904_180 Hb_005843_040--Hb_007904_180 Hb_000108_080 Hb_000108_080 Hb_005843_040--Hb_000108_080 Hb_005843_040--Hb_000640_200 Hb_000920_250 Hb_000920_250 Hb_000465_480--Hb_000920_250 Hb_001902_060 Hb_001902_060 Hb_000465_480--Hb_001902_060 Hb_001059_100 Hb_001059_100 Hb_000465_480--Hb_001059_100 Hb_010578_060 Hb_010578_060 Hb_000465_480--Hb_010578_060 Hb_000465_170 Hb_000465_170 Hb_000465_480--Hb_000465_170 Hb_007676_100 Hb_007676_100 Hb_000465_480--Hb_007676_100 Hb_002217_150 Hb_002217_150 Hb_003236_010--Hb_002217_150 Hb_003236_010--Hb_000108_080 Hb_006816_120 Hb_006816_120 Hb_003236_010--Hb_006816_120 Hb_002411_120 Hb_002411_120 Hb_003236_010--Hb_002411_120 Hb_003236_010--Hb_027073_060 Hb_001080_270 Hb_001080_270 Hb_003236_010--Hb_001080_270 Hb_003994_100 Hb_003994_100 Hb_000080_170--Hb_003994_100 Hb_000832_320 Hb_000832_320 Hb_000080_170--Hb_000832_320 Hb_006663_040 Hb_006663_040 Hb_000080_170--Hb_006663_040 Hb_004543_030 Hb_004543_030 Hb_000080_170--Hb_004543_030 Hb_018133_050 Hb_018133_050 Hb_000080_170--Hb_018133_050 Hb_015475_020 Hb_015475_020 Hb_000080_170--Hb_015475_020 Hb_000096_180 Hb_000096_180 Hb_027073_060--Hb_000096_180 Hb_007885_070 Hb_007885_070 Hb_027073_060--Hb_007885_070 Hb_025477_060 Hb_025477_060 Hb_027073_060--Hb_025477_060 Hb_000250_070 Hb_000250_070 Hb_027073_060--Hb_000250_070 Hb_000357_080 Hb_000357_080 Hb_027073_060--Hb_000357_080 Hb_002043_170 Hb_002043_170 Hb_027073_060--Hb_002043_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
25.5748 59.7973 6.50691 3.11902 74.2784 48.9621
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.4703 4.10089 25.594 12.8256 15.0815

CAGE analysis