Hb_001146_030

Information

Type -
Description -
Location Contig1146: 15065-16959
Sequence    

Annotation

kegg
ID rcu:RCOM_1313250
description cytochrome P450, putative (EC:1.14.13.21)
nr
ID XP_002518911.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9ZNR0
description Cytochrome P450 78A6 OS=Arabidopsis thaliana GN=CYP78A6 PE=2 SV=1
trembl
ID B9RYU2
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1313250 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 78a9-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001146_030 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_001295_080 0.0738632851 - - Protein KES1, putative [Ricinus communis]
3 Hb_001085_200 0.1033840375 transcription factor TF Family: ARID PREDICTED: high mobility group B protein 15 [Jatropha curcas]
4 Hb_000844_060 0.1067603198 - - PREDICTED: uncharacterized protein LOC105633706 [Jatropha curcas]
5 Hb_002188_150 0.1082540037 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001053_050 0.1082558701 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Vitis vinifera]
7 Hb_054865_040 0.1092315515 - - PREDICTED: auxin-induced protein 15A [Jatropha curcas]
8 Hb_003622_050 0.1093439614 - - PREDICTED: respiratory burst oxidase homolog protein A-like [Jatropha curcas]
9 Hb_010021_040 0.1098094188 - - PREDICTED: uncharacterized protein LOC105630811 [Jatropha curcas]
10 Hb_001610_100 0.1110004243 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
11 Hb_007101_090 0.1121994371 - - PREDICTED: protein ALTERED XYLOGLUCAN 4 [Jatropha curcas]
12 Hb_000336_130 0.1142926562 - - Triacylglycerol lipase 2 precursor, putative [Ricinus communis]
13 Hb_000768_080 0.1179224019 - - Mlo protein [Hevea brasiliensis]
14 Hb_169492_010 0.1181765398 - - PREDICTED: expansin-like B1 [Jatropha curcas]
15 Hb_008864_050 0.1182763087 - - protein binding protein, putative [Ricinus communis]
16 Hb_001775_010 0.1188482157 - - conserved hypothetical protein [Ricinus communis]
17 Hb_068804_110 0.1189656929 - - PREDICTED: serine hydroxymethyltransferase, mitochondrial [Jatropha curcas]
18 Hb_001999_330 0.1207687546 - - hypothetical protein PRUPE_ppa022262mg, partial [Prunus persica]
19 Hb_003253_030 0.1244309633 - - lysosomal pro-X carboxypeptidase, putative [Ricinus communis]
20 Hb_002620_040 0.1246649673 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_001146_030 Hb_001146_030 Hb_001295_080 Hb_001295_080 Hb_001146_030--Hb_001295_080 Hb_001085_200 Hb_001085_200 Hb_001146_030--Hb_001085_200 Hb_000844_060 Hb_000844_060 Hb_001146_030--Hb_000844_060 Hb_002188_150 Hb_002188_150 Hb_001146_030--Hb_002188_150 Hb_001053_050 Hb_001053_050 Hb_001146_030--Hb_001053_050 Hb_054865_040 Hb_054865_040 Hb_001146_030--Hb_054865_040 Hb_002620_040 Hb_002620_040 Hb_001295_080--Hb_002620_040 Hb_000139_030 Hb_000139_030 Hb_001295_080--Hb_000139_030 Hb_010021_040 Hb_010021_040 Hb_001295_080--Hb_010021_040 Hb_057880_020 Hb_057880_020 Hb_001295_080--Hb_057880_020 Hb_000462_160 Hb_000462_160 Hb_001295_080--Hb_000462_160 Hb_003253_030 Hb_003253_030 Hb_001085_200--Hb_003253_030 Hb_068804_110 Hb_068804_110 Hb_001085_200--Hb_068804_110 Hb_003622_050 Hb_003622_050 Hb_001085_200--Hb_003622_050 Hb_001085_200--Hb_002188_150 Hb_001085_200--Hb_054865_040 Hb_000844_060--Hb_003253_030 Hb_000844_060--Hb_003622_050 Hb_000645_270 Hb_000645_270 Hb_000844_060--Hb_000645_270 Hb_001999_330 Hb_001999_330 Hb_000844_060--Hb_001999_330 Hb_031194_020 Hb_031194_020 Hb_000844_060--Hb_031194_020 Hb_002600_110 Hb_002600_110 Hb_000844_060--Hb_002600_110 Hb_002188_150--Hb_003622_050 Hb_169492_010 Hb_169492_010 Hb_002188_150--Hb_169492_010 Hb_002188_150--Hb_001053_050 Hb_001775_010 Hb_001775_010 Hb_002188_150--Hb_001775_010 Hb_077976_010 Hb_077976_010 Hb_002188_150--Hb_077976_010 Hb_001053_050--Hb_003622_050 Hb_007101_090 Hb_007101_090 Hb_001053_050--Hb_007101_090 Hb_001053_050--Hb_001775_010 Hb_001053_050--Hb_000645_270 Hb_000768_080 Hb_000768_080 Hb_001053_050--Hb_000768_080 Hb_001856_290 Hb_001856_290 Hb_054865_040--Hb_001856_290 Hb_015807_020 Hb_015807_020 Hb_054865_040--Hb_015807_020 Hb_054865_040--Hb_007101_090 Hb_052139_010 Hb_052139_010 Hb_054865_040--Hb_052139_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0205192 0.0573528 0.10432 0 0.0122535
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0177158 0.699614

CAGE analysis