Hb_001147_030

Information

Type -
Description -
Location Contig1147: 42679-63134
Sequence    

Annotation

kegg
ID rcu:RCOM_0685770
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.23 1.3.1.74)
nr
ID KDP31584.1
description hypothetical protein JCGZ_14809 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067KIB5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14809 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001147_030 0.0 - - hypothetical protein JCGZ_14809 [Jatropha curcas]
2 Hb_170401_010 0.0859226556 - - receptor serine/threonine kinase, putative [Ricinus communis]
3 Hb_000500_230 0.1239460875 - - hypothetical protein RCOM_0634810 [Ricinus communis]
4 Hb_000270_250 0.1248095817 transcription factor TF Family: MYB hypothetical protein POPTR_0015s07900g [Populus trichocarpa]
5 Hb_004907_070 0.1375366116 - - PREDICTED: protein phosphatase 2C 37 [Jatropha curcas]
6 Hb_002010_080 0.1376797781 - - PREDICTED: probable receptor-like protein kinase At1g11050 [Jatropha curcas]
7 Hb_000010_370 0.1410838908 - - PREDICTED: uncharacterized protein LOC105640263 [Jatropha curcas]
8 Hb_000260_480 0.1416245706 transcription factor TF Family: GRAS PREDICTED: protein SCARECROW [Jatropha curcas]
9 Hb_000140_220 0.1448987545 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 22 [Jatropha curcas]
10 Hb_000049_290 0.146694042 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 1 [Jatropha curcas]
11 Hb_000103_410 0.1495417544 - - PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Jatropha curcas]
12 Hb_183025_010 0.1506535303 - - PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Jatropha curcas]
13 Hb_000320_450 0.1537252442 - - secretory peroxidase [Hevea brasiliensis]
14 Hb_000427_040 0.1550455743 - - Gibberellin receptor GID1, putative [Ricinus communis]
15 Hb_002871_110 0.1550783635 transcription factor TF Family: ARF hypothetical protein POPTR_0014s12980g [Populus trichocarpa]
16 Hb_002849_180 0.1564687036 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
17 Hb_031862_120 0.1566600884 - - PREDICTED: root phototropism protein 3 [Jatropha curcas]
18 Hb_000941_090 0.1584482933 - - PREDICTED: protein trichome birefringence [Jatropha curcas]
19 Hb_032779_010 0.1586904075 - - unnamed protein product [Vitis vinifera]
20 Hb_001195_250 0.1607410369 - - lrr receptor protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001147_030 Hb_001147_030 Hb_170401_010 Hb_170401_010 Hb_001147_030--Hb_170401_010 Hb_000500_230 Hb_000500_230 Hb_001147_030--Hb_000500_230 Hb_000270_250 Hb_000270_250 Hb_001147_030--Hb_000270_250 Hb_004907_070 Hb_004907_070 Hb_001147_030--Hb_004907_070 Hb_002010_080 Hb_002010_080 Hb_001147_030--Hb_002010_080 Hb_000010_370 Hb_000010_370 Hb_001147_030--Hb_000010_370 Hb_170401_010--Hb_000500_230 Hb_170401_010--Hb_000010_370 Hb_000260_480 Hb_000260_480 Hb_170401_010--Hb_000260_480 Hb_000140_220 Hb_000140_220 Hb_170401_010--Hb_000140_220 Hb_000049_290 Hb_000049_290 Hb_170401_010--Hb_000049_290 Hb_006970_170 Hb_006970_170 Hb_000500_230--Hb_006970_170 Hb_000500_230--Hb_000010_370 Hb_000500_230--Hb_000260_480 Hb_007894_120 Hb_007894_120 Hb_000500_230--Hb_007894_120 Hb_002871_110 Hb_002871_110 Hb_000500_230--Hb_002871_110 Hb_017491_010 Hb_017491_010 Hb_000500_230--Hb_017491_010 Hb_000427_040 Hb_000427_040 Hb_000270_250--Hb_000427_040 Hb_032779_010 Hb_032779_010 Hb_000270_250--Hb_032779_010 Hb_003073_040 Hb_003073_040 Hb_000270_250--Hb_003073_040 Hb_000270_250--Hb_000500_230 Hb_004880_050 Hb_004880_050 Hb_000270_250--Hb_004880_050 Hb_019837_010 Hb_019837_010 Hb_004907_070--Hb_019837_010 Hb_001951_230 Hb_001951_230 Hb_004907_070--Hb_001951_230 Hb_000594_150 Hb_000594_150 Hb_004907_070--Hb_000594_150 Hb_001357_060 Hb_001357_060 Hb_004907_070--Hb_001357_060 Hb_002809_120 Hb_002809_120 Hb_004907_070--Hb_002809_120 Hb_004976_080 Hb_004976_080 Hb_004907_070--Hb_004976_080 Hb_007102_010 Hb_007102_010 Hb_002010_080--Hb_007102_010 Hb_004724_300 Hb_004724_300 Hb_002010_080--Hb_004724_300 Hb_001821_050 Hb_001821_050 Hb_002010_080--Hb_001821_050 Hb_002375_080 Hb_002375_080 Hb_002010_080--Hb_002375_080 Hb_004837_110 Hb_004837_110 Hb_002010_080--Hb_004837_110 Hb_012799_040 Hb_012799_040 Hb_002010_080--Hb_012799_040 Hb_000025_590 Hb_000025_590 Hb_000010_370--Hb_000025_590 Hb_000010_370--Hb_002871_110 Hb_000010_370--Hb_006970_170 Hb_000010_370--Hb_000260_480 Hb_000010_370--Hb_007894_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0189838 0.189484 0.151003 0.132217 0 0.00893717
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0433973 0.214974

CAGE analysis