Hb_001147_080

Information

Type -
Description -
Location Contig1147: 93074-95427
Sequence    

Annotation

kegg
ID rcu:RCOM_1045360
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.26)
nr
ID XP_002523485.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID P17801
description Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2
trembl
ID B9SBW6
description Serine/threonine-protein kinase OS=Ricinus communis GN=RCOM_1045360 PE=3 SV=1
Gene Ontology
ID GO:0000166
description receptor protein kinase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001147_080 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_001147_090 0.191102745 transcription factor TF Family: GRAS DELLA protein GAI1, putative [Ricinus communis]
3 Hb_102129_010 0.2042531211 - - multicopper oxidase, putative [Ricinus communis]
4 Hb_002984_020 0.2337622873 - - hypothetical protein EUGRSUZ_J02661 [Eucalyptus grandis]
5 Hb_048476_160 0.2387272105 - - hypothetical protein JCGZ_19593 [Jatropha curcas]
6 Hb_003438_060 0.2428949782 - - -
7 Hb_000207_420 0.2534595416 - - hypothetical protein POPTR_0019s11600g [Populus trichocarpa]
8 Hb_158803_020 0.2574946353 - - hypothetical protein JCGZ_12890 [Jatropha curcas]
9 Hb_000483_230 0.2676913298 - - PREDICTED: cationic amino acid transporter 6, chloroplastic-like [Jatropha curcas]
10 Hb_005127_040 0.2681783248 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
11 Hb_000805_330 0.27083518 - - PREDICTED: ricin-like [Elaeis guineensis]
12 Hb_145708_010 0.2728789318 - - PREDICTED: transcription factor ILR3-like isoform X1 [Jatropha curcas]
13 Hb_010810_040 0.2735145947 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
14 Hb_000008_040 0.2741262176 - - hypothetical protein POPTR_0009s01550g [Populus trichocarpa]
15 Hb_125948_010 0.2846435935 - - heat-shock protein, putative [Ricinus communis]
16 Hb_000029_280 0.2849972498 - - PREDICTED: uncharacterized protein LOC105631804 [Jatropha curcas]
17 Hb_008092_030 0.2935346228 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA27, putative [Ricinus communis]
18 Hb_000321_010 0.2998678763 - - Chitinase 1 precursor, putative [Ricinus communis]
19 Hb_004611_060 0.3025846449 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
20 Hb_002078_210 0.3027888817 - - PREDICTED: cytochrome P450 78A5-like [Jatropha curcas]

Gene co-expression network

sample Hb_001147_080 Hb_001147_080 Hb_001147_090 Hb_001147_090 Hb_001147_080--Hb_001147_090 Hb_102129_010 Hb_102129_010 Hb_001147_080--Hb_102129_010 Hb_002984_020 Hb_002984_020 Hb_001147_080--Hb_002984_020 Hb_048476_160 Hb_048476_160 Hb_001147_080--Hb_048476_160 Hb_003438_060 Hb_003438_060 Hb_001147_080--Hb_003438_060 Hb_000207_420 Hb_000207_420 Hb_001147_080--Hb_000207_420 Hb_001147_090--Hb_102129_010 Hb_001147_090--Hb_048476_160 Hb_010810_040 Hb_010810_040 Hb_001147_090--Hb_010810_040 Hb_000008_040 Hb_000008_040 Hb_001147_090--Hb_000008_040 Hb_145708_010 Hb_145708_010 Hb_001147_090--Hb_145708_010 Hb_102129_010--Hb_048476_160 Hb_102129_010--Hb_145708_010 Hb_158803_020 Hb_158803_020 Hb_102129_010--Hb_158803_020 Hb_102129_010--Hb_010810_040 Hb_007951_090 Hb_007951_090 Hb_002984_020--Hb_007951_090 Hb_003925_130 Hb_003925_130 Hb_002984_020--Hb_003925_130 Hb_072290_010 Hb_072290_010 Hb_002984_020--Hb_072290_010 Hb_002984_020--Hb_010810_040 Hb_000304_040 Hb_000304_040 Hb_002984_020--Hb_000304_040 Hb_178711_010 Hb_178711_010 Hb_002984_020--Hb_178711_010 Hb_048476_160--Hb_158803_020 Hb_048476_160--Hb_003438_060 Hb_000483_230 Hb_000483_230 Hb_048476_160--Hb_000483_230 Hb_003438_060--Hb_102129_010 Hb_000122_060 Hb_000122_060 Hb_003438_060--Hb_000122_060 Hb_005654_020 Hb_005654_020 Hb_003438_060--Hb_005654_020 Hb_003438_060--Hb_145708_010 Hb_002311_430 Hb_002311_430 Hb_000207_420--Hb_002311_430 Hb_001481_110 Hb_001481_110 Hb_000207_420--Hb_001481_110 Hb_001610_050 Hb_001610_050 Hb_000207_420--Hb_001610_050 Hb_000805_330 Hb_000805_330 Hb_000207_420--Hb_000805_330 Hb_006816_540 Hb_006816_540 Hb_000207_420--Hb_006816_540 Hb_000431_030 Hb_000431_030 Hb_000207_420--Hb_000431_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0696422 0 0.0554707 0.0209267 0.0104833
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis