Hb_001148_030

Information

Type -
Description -
Location Contig1148: 28910-31772
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001148_030 0.0 - - -
2 Hb_010334_020 0.1835307566 - - PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 1-like [Sesamum indicum]
3 Hb_000645_210 0.2093153475 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 5-like isoform X2 [Jatropha curcas]
4 Hb_000300_130 0.2184033101 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105141503 [Populus euphratica]
5 Hb_001504_120 0.227958954 - - -
6 Hb_000165_210 0.2389518543 - - PREDICTED: trihelix transcription factor ASIL2 isoform X2 [Jatropha curcas]
7 Hb_000318_200 0.2396549146 - - PREDICTED: hyoscyamine 6-dioxygenase-like [Jatropha curcas]
8 Hb_001433_180 0.2409370135 - - hypothetical protein JCGZ_23261 [Jatropha curcas]
9 Hb_007259_040 0.2434006833 - - hypothetical protein VITISV_005492 [Vitis vinifera]
10 Hb_031527_060 0.2434612283 - - glutamate decarboxylase, putative [Ricinus communis]
11 Hb_070277_010 0.2440512735 - - PREDICTED: purine permease 3-like [Jatropha curcas]
12 Hb_138585_110 0.2476694963 - - -
13 Hb_001439_110 0.248335342 transcription factor TF Family: ERF PREDICTED: uncharacterized protein LOC105133481 [Populus euphratica]
14 Hb_000120_390 0.252487164 - - PREDICTED: uncharacterized transporter YBR287W-like [Jatropha curcas]
15 Hb_006573_300 0.2556093795 - - ATP binding protein, putative [Ricinus communis]
16 Hb_001206_090 0.2563900425 - - pyruvate decarboxylase [Hevea brasiliensis]
17 Hb_004195_110 0.2594347462 - - hypothetical protein JCGZ_24010 [Jatropha curcas]
18 Hb_000796_250 0.2599005633 transcription factor TF Family: WRKY WRKY1 [Hevea brasiliensis]
19 Hb_002304_140 0.2602505242 - - ring finger protein, putative [Ricinus communis]
20 Hb_005679_100 0.2637179853 - - hypothetical protein POPTR_0013s15630g [Populus trichocarpa]

Gene co-expression network

sample Hb_001148_030 Hb_001148_030 Hb_010334_020 Hb_010334_020 Hb_001148_030--Hb_010334_020 Hb_000645_210 Hb_000645_210 Hb_001148_030--Hb_000645_210 Hb_000300_130 Hb_000300_130 Hb_001148_030--Hb_000300_130 Hb_001504_120 Hb_001504_120 Hb_001148_030--Hb_001504_120 Hb_000165_210 Hb_000165_210 Hb_001148_030--Hb_000165_210 Hb_000318_200 Hb_000318_200 Hb_001148_030--Hb_000318_200 Hb_138585_110 Hb_138585_110 Hb_010334_020--Hb_138585_110 Hb_000005_250 Hb_000005_250 Hb_010334_020--Hb_000005_250 Hb_000093_150 Hb_000093_150 Hb_010334_020--Hb_000093_150 Hb_010334_020--Hb_000645_210 Hb_004462_010 Hb_004462_010 Hb_010334_020--Hb_004462_010 Hb_000928_040 Hb_000928_040 Hb_000645_210--Hb_000928_040 Hb_127886_010 Hb_127886_010 Hb_000645_210--Hb_127886_010 Hb_001206_090 Hb_001206_090 Hb_000645_210--Hb_001206_090 Hb_031527_060 Hb_031527_060 Hb_000645_210--Hb_031527_060 Hb_001114_070 Hb_001114_070 Hb_000645_210--Hb_001114_070 Hb_000645_210--Hb_000093_150 Hb_000300_130--Hb_031527_060 Hb_009545_020 Hb_009545_020 Hb_000300_130--Hb_009545_020 Hb_000300_130--Hb_000165_210 Hb_000300_130--Hb_001206_090 Hb_183623_010 Hb_183623_010 Hb_000300_130--Hb_183623_010 Hb_001504_120--Hb_138585_110 Hb_080147_100 Hb_080147_100 Hb_001504_120--Hb_080147_100 Hb_000796_250 Hb_000796_250 Hb_001504_120--Hb_000796_250 Hb_001433_180 Hb_001433_180 Hb_001504_120--Hb_001433_180 Hb_000805_320 Hb_000805_320 Hb_001504_120--Hb_000805_320 Hb_002236_050 Hb_002236_050 Hb_001504_120--Hb_002236_050 Hb_000853_060 Hb_000853_060 Hb_000165_210--Hb_000853_060 Hb_000120_390 Hb_000120_390 Hb_000165_210--Hb_000120_390 Hb_000414_110 Hb_000414_110 Hb_000165_210--Hb_000414_110 Hb_000165_210--Hb_001206_090 Hb_002304_140 Hb_002304_140 Hb_000165_210--Hb_002304_140 Hb_000879_190 Hb_000879_190 Hb_000165_210--Hb_000879_190 Hb_000417_320 Hb_000417_320 Hb_000318_200--Hb_000417_320 Hb_000318_200--Hb_000796_250 Hb_000318_200--Hb_000120_390 Hb_027380_200 Hb_027380_200 Hb_000318_200--Hb_027380_200 Hb_008147_070 Hb_008147_070 Hb_000318_200--Hb_008147_070 Hb_119494_010 Hb_119494_010 Hb_000318_200--Hb_119494_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.766642 6.88561 0.0913907 3.80994 0.733136 0.677579
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.25791 3.95158 0.693297 16.9871 0

CAGE analysis