Hb_001148_060

Information

Type -
Description -
Location Contig1148: 77950-78588
Sequence    

Annotation

kegg
ID egr:104434717
description putative disease resistance protein RGA4
nr
ID KDP42481.1
description hypothetical protein JCGZ_00278 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L1X8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00278 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001148_060 0.0 - - hypothetical protein JCGZ_00278 [Jatropha curcas]
2 Hb_002759_100 0.1273207383 - - hypothetical protein JCGZ_21777 [Jatropha curcas]
3 Hb_005305_120 0.136346172 - - PREDICTED: calcium-dependent protein kinase 8-like [Jatropha curcas]
4 Hb_172632_130 0.1379003178 - - hypothetical protein JCGZ_22584 [Jatropha curcas]
5 Hb_021409_070 0.1581561442 - - PREDICTED: transcription factor bHLH157 isoform X1 [Jatropha curcas]
6 Hb_000270_830 0.1637393272 - - aldehyde dehydrogenase, putative [Ricinus communis]
7 Hb_007793_050 0.1649617906 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003687_130 0.1728140753 - - PREDICTED: probable methyltransferase PMT3 [Jatropha curcas]
9 Hb_000680_010 0.1734565694 - - PREDICTED: putative hydrolase C777.06c [Populus euphratica]
10 Hb_116702_010 0.1755045556 - - Leucine-rich repeat protein kinase family protein [Theobroma cacao]
11 Hb_000000_310 0.1764748362 - - metalloendopeptidase, putative [Ricinus communis]
12 Hb_001153_100 0.1768249983 transcription factor TF Family: HB PREDICTED: homeobox protein HD1 [Jatropha curcas]
13 Hb_000397_150 0.1769906357 - - PREDICTED: probable flavin-containing monooxygenase 1 [Jatropha curcas]
14 Hb_003216_130 0.1773147544 - - PREDICTED: uncharacterized protein LOC105641500 [Jatropha curcas]
15 Hb_011310_150 0.1805733655 - - PREDICTED: SPX domain-containing protein 1-like [Jatropha curcas]
16 Hb_002835_280 0.1815598069 - - PREDICTED: L-type lectin-domain containing receptor kinase S.1 [Jatropha curcas]
17 Hb_000300_510 0.1831797388 - - PREDICTED: uncharacterized protein LOC105632605 [Jatropha curcas]
18 Hb_009862_020 0.1837399149 - - PREDICTED: uncharacterized protein LOC105650670 [Jatropha curcas]
19 Hb_005162_140 0.1849023121 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 8 [Jatropha curcas]
20 Hb_000120_990 0.1849604728 - - PREDICTED: MATE efflux family protein 3, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_001148_060 Hb_001148_060 Hb_002759_100 Hb_002759_100 Hb_001148_060--Hb_002759_100 Hb_005305_120 Hb_005305_120 Hb_001148_060--Hb_005305_120 Hb_172632_130 Hb_172632_130 Hb_001148_060--Hb_172632_130 Hb_021409_070 Hb_021409_070 Hb_001148_060--Hb_021409_070 Hb_000270_830 Hb_000270_830 Hb_001148_060--Hb_000270_830 Hb_007793_050 Hb_007793_050 Hb_001148_060--Hb_007793_050 Hb_002759_100--Hb_005305_120 Hb_003687_010 Hb_003687_010 Hb_002759_100--Hb_003687_010 Hb_002759_100--Hb_000270_830 Hb_003581_130 Hb_003581_130 Hb_002759_100--Hb_003581_130 Hb_011310_150 Hb_011310_150 Hb_002759_100--Hb_011310_150 Hb_002835_280 Hb_002835_280 Hb_005305_120--Hb_002835_280 Hb_000861_100 Hb_000861_100 Hb_005305_120--Hb_000861_100 Hb_001124_140 Hb_001124_140 Hb_005305_120--Hb_001124_140 Hb_009449_100 Hb_009449_100 Hb_005305_120--Hb_009449_100 Hb_005731_100 Hb_005731_100 Hb_005305_120--Hb_005731_100 Hb_008494_030 Hb_008494_030 Hb_172632_130--Hb_008494_030 Hb_001999_320 Hb_001999_320 Hb_172632_130--Hb_001999_320 Hb_105033_010 Hb_105033_010 Hb_172632_130--Hb_105033_010 Hb_172632_130--Hb_021409_070 Hb_172632_130--Hb_000270_830 Hb_003740_020 Hb_003740_020 Hb_021409_070--Hb_003740_020 Hb_000566_010 Hb_000566_010 Hb_021409_070--Hb_000566_010 Hb_003680_220 Hb_003680_220 Hb_021409_070--Hb_003680_220 Hb_000007_090 Hb_000007_090 Hb_021409_070--Hb_000007_090 Hb_005665_090 Hb_005665_090 Hb_021409_070--Hb_005665_090 Hb_000414_080 Hb_000414_080 Hb_021409_070--Hb_000414_080 Hb_000270_710 Hb_000270_710 Hb_000270_830--Hb_000270_710 Hb_025045_010 Hb_025045_010 Hb_000270_830--Hb_025045_010 Hb_000997_290 Hb_000997_290 Hb_000270_830--Hb_000997_290 Hb_027380_150 Hb_027380_150 Hb_000270_830--Hb_027380_150 Hb_001969_130 Hb_001969_130 Hb_000270_830--Hb_001969_130 Hb_000487_370 Hb_000487_370 Hb_000270_830--Hb_000487_370 Hb_004003_030 Hb_004003_030 Hb_007793_050--Hb_004003_030 Hb_001268_340 Hb_001268_340 Hb_007793_050--Hb_001268_340 Hb_004032_160 Hb_004032_160 Hb_007793_050--Hb_004032_160 Hb_000030_160 Hb_000030_160 Hb_007793_050--Hb_000030_160 Hb_002903_100 Hb_002903_100 Hb_007793_050--Hb_002903_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.876934 0.936109 1.21264 1.53139 0.0799596 0.0558252
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.368279 0.289472 0.255381 0.384456 1.83815

CAGE analysis