Hb_001148_090

Information

Type -
Description -
Location Contig1148: 89553-95659
Sequence    

Annotation

kegg
ID rcu:RCOM_0496690
description hypothetical protein
nr
ID KDP32508.1
description hypothetical protein JCGZ_14711 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KBU7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14711 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001148_090 0.0 - - hypothetical protein JCGZ_14711 [Jatropha curcas]
2 Hb_002781_050 0.1235278153 - - cytochrome B5 isoform 1, putative [Ricinus communis]
3 Hb_000172_280 0.1246373486 - - aspartate aminotransferase, putative [Ricinus communis]
4 Hb_000889_010 0.1251652722 transcription factor TF Family: MYB-related hypothetical protein PRUPE_ppa014728mg [Prunus persica]
5 Hb_004607_070 0.1371372936 - - integral membrane protein, putative [Ricinus communis]
6 Hb_001946_310 0.1415529636 - - PREDICTED: probable ethanolamine kinase isoform X2 [Jatropha curcas]
7 Hb_002539_040 0.1418825818 - - SPFH domain-containing protein 2 precursor, putative [Ricinus communis]
8 Hb_000684_520 0.1464561154 - - glutathione S-transferase L3-like [Jatropha curcas]
9 Hb_001014_190 0.1472426638 - - PREDICTED: uncharacterized protein LOC105647294 [Jatropha curcas]
10 Hb_001799_060 0.1473306385 - - Rab6 [Hevea brasiliensis]
11 Hb_009898_040 0.1484869777 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001148_100 0.1493839196 - - -
13 Hb_000220_110 0.1515721287 - - fructose-bisphosphate aldolase, putative [Ricinus communis]
14 Hb_002486_080 0.1517317919 - - PREDICTED: cytosolic endo-beta-N-acetylglucosaminidase isoform X1 [Jatropha curcas]
15 Hb_000175_470 0.1519974047 - - lactoylglutathione lyase, putative [Ricinus communis]
16 Hb_000027_210 0.1559077134 - - Os01g0689300, partial [Oryza sativa Japonica Group]
17 Hb_002151_060 0.1560275903 - - PREDICTED: DNA-directed RNA polymerase III subunit rpc4 [Jatropha curcas]
18 Hb_048476_060 0.1566574186 - - PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like isoform X2 [Jatropha curcas]
19 Hb_147245_010 0.1582062851 - - casein kinase, putative [Ricinus communis]
20 Hb_007416_070 0.1588300736 transcription factor TF Family: B3 hypothetical protein JCGZ_07038 [Jatropha curcas]

Gene co-expression network

sample Hb_001148_090 Hb_001148_090 Hb_002781_050 Hb_002781_050 Hb_001148_090--Hb_002781_050 Hb_000172_280 Hb_000172_280 Hb_001148_090--Hb_000172_280 Hb_000889_010 Hb_000889_010 Hb_001148_090--Hb_000889_010 Hb_004607_070 Hb_004607_070 Hb_001148_090--Hb_004607_070 Hb_001946_310 Hb_001946_310 Hb_001148_090--Hb_001946_310 Hb_002539_040 Hb_002539_040 Hb_001148_090--Hb_002539_040 Hb_000696_070 Hb_000696_070 Hb_002781_050--Hb_000696_070 Hb_003602_020 Hb_003602_020 Hb_002781_050--Hb_003602_020 Hb_001148_100 Hb_001148_100 Hb_002781_050--Hb_001148_100 Hb_001369_630 Hb_001369_630 Hb_002781_050--Hb_001369_630 Hb_048476_060 Hb_048476_060 Hb_002781_050--Hb_048476_060 Hb_000220_110 Hb_000220_110 Hb_000172_280--Hb_000220_110 Hb_002486_080 Hb_002486_080 Hb_000172_280--Hb_002486_080 Hb_124315_010 Hb_124315_010 Hb_000172_280--Hb_124315_010 Hb_000465_150 Hb_000465_150 Hb_000172_280--Hb_000465_150 Hb_000907_150 Hb_000907_150 Hb_000172_280--Hb_000907_150 Hb_009898_040 Hb_009898_040 Hb_000889_010--Hb_009898_040 Hb_004449_180 Hb_004449_180 Hb_000889_010--Hb_004449_180 Hb_000684_520 Hb_000684_520 Hb_000889_010--Hb_000684_520 Hb_001799_060 Hb_001799_060 Hb_000889_010--Hb_001799_060 Hb_168893_020 Hb_168893_020 Hb_000889_010--Hb_168893_020 Hb_000046_170 Hb_000046_170 Hb_004607_070--Hb_000046_170 Hb_000035_390 Hb_000035_390 Hb_004607_070--Hb_000035_390 Hb_020390_010 Hb_020390_010 Hb_004607_070--Hb_020390_010 Hb_000928_190 Hb_000928_190 Hb_004607_070--Hb_000928_190 Hb_005648_010 Hb_005648_010 Hb_004607_070--Hb_005648_010 Hb_009711_050 Hb_009711_050 Hb_004607_070--Hb_009711_050 Hb_000800_090 Hb_000800_090 Hb_001946_310--Hb_000800_090 Hb_001946_310--Hb_001799_060 Hb_000402_130 Hb_000402_130 Hb_001946_310--Hb_000402_130 Hb_001318_050 Hb_001318_050 Hb_001946_310--Hb_001318_050 Hb_003305_020 Hb_003305_020 Hb_001946_310--Hb_003305_020 Hb_000025_190 Hb_000025_190 Hb_001946_310--Hb_000025_190 Hb_005408_070 Hb_005408_070 Hb_002539_040--Hb_005408_070 Hb_000175_470 Hb_000175_470 Hb_002539_040--Hb_000175_470 Hb_000567_180 Hb_000567_180 Hb_002539_040--Hb_000567_180 Hb_002539_040--Hb_000889_010 Hb_002539_040--Hb_001148_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.153147 0.344806 0.541128 1.59507 0.163747 0.0659691
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.51107 0.502344 0.182411 1.11676 0.607478

CAGE analysis