Hb_001153_050

Information

Type -
Description -
Location Contig1153: 16033-20342
Sequence    

Annotation

kegg
ID rcu:RCOM_1682520
description WD-repeat protein, putative
nr
ID XP_012087035.1
description PREDICTED: protein FIZZY-RELATED 2 [Jatropha curcas]
swissprot
ID Q8L3Z8
description Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN=FZR2 PE=1 SV=1
trembl
ID A0A067JNS5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20693 PE=4 SV=1
Gene Ontology
ID GO:0005515
description protein fizzy-related 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04595: 16353-20134
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001153_050 0.0 - - PREDICTED: protein FIZZY-RELATED 2 [Jatropha curcas]
2 Hb_006573_160 0.0654012844 - - PREDICTED: dnaJ protein ERDJ2A-like [Jatropha curcas]
3 Hb_073973_150 0.073047579 - - PREDICTED: aminoacylase-1 isoform X1 [Jatropha curcas]
4 Hb_002814_110 0.0787140584 - - PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Jatropha curcas]
5 Hb_011972_020 0.0793340467 - - protein binding protein, putative [Ricinus communis]
6 Hb_005323_010 0.082308012 - - PREDICTED: uncharacterized protein LOC105642810 [Jatropha curcas]
7 Hb_005895_010 0.0823715894 - - PREDICTED: uncharacterized protein LOC105643387 isoform X1 [Jatropha curcas]
8 Hb_000640_070 0.0843371952 - - PREDICTED: vacuolar protein sorting-associated protein 51 homolog [Jatropha curcas]
9 Hb_098209_010 0.0884412577 - - ATP synthase subunit beta vacuolar, putative [Ricinus communis]
10 Hb_000820_150 0.0892526875 - - PREDICTED: ACT domain-containing protein ACR9-like [Jatropha curcas]
11 Hb_007800_020 0.0908697583 - - PREDICTED: probable arabinosyltransferase ARAD1 isoform X1 [Jatropha curcas]
12 Hb_003104_040 0.0923589717 - - PREDICTED: insulin-degrading enzyme isoform X1 [Jatropha curcas]
13 Hb_004324_330 0.0934875588 - - PREDICTED: uncharacterized protein LOC105648374 [Jatropha curcas]
14 Hb_001194_020 0.0940112289 - - microtubule associated protein xmap215, putative [Ricinus communis]
15 Hb_002539_110 0.0962307436 - - hypothetical protein JCGZ_15697 [Jatropha curcas]
16 Hb_000362_170 0.0963509168 - - PREDICTED: uncharacterized protein LOC105635728 [Jatropha curcas]
17 Hb_002014_040 0.0963833682 - - site-1 protease, putative [Ricinus communis]
18 Hb_002475_040 0.0971930882 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial [Jatropha curcas]
19 Hb_012262_040 0.0979274037 - - PREDICTED: uncharacterized protein LOC105633697 [Jatropha curcas]
20 Hb_000878_160 0.0986153594 - - PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_001153_050 Hb_001153_050 Hb_006573_160 Hb_006573_160 Hb_001153_050--Hb_006573_160 Hb_073973_150 Hb_073973_150 Hb_001153_050--Hb_073973_150 Hb_002814_110 Hb_002814_110 Hb_001153_050--Hb_002814_110 Hb_011972_020 Hb_011972_020 Hb_001153_050--Hb_011972_020 Hb_005323_010 Hb_005323_010 Hb_001153_050--Hb_005323_010 Hb_005895_010 Hb_005895_010 Hb_001153_050--Hb_005895_010 Hb_006573_160--Hb_011972_020 Hb_006573_160--Hb_002814_110 Hb_098209_010 Hb_098209_010 Hb_006573_160--Hb_098209_010 Hb_000302_170 Hb_000302_170 Hb_006573_160--Hb_000302_170 Hb_000102_050 Hb_000102_050 Hb_006573_160--Hb_000102_050 Hb_000640_070 Hb_000640_070 Hb_073973_150--Hb_000640_070 Hb_001194_020 Hb_001194_020 Hb_073973_150--Hb_001194_020 Hb_008397_010 Hb_008397_010 Hb_073973_150--Hb_008397_010 Hb_000284_230 Hb_000284_230 Hb_073973_150--Hb_000284_230 Hb_003104_040 Hb_003104_040 Hb_073973_150--Hb_003104_040 Hb_002475_040 Hb_002475_040 Hb_073973_150--Hb_002475_040 Hb_002814_110--Hb_011972_020 Hb_000130_420 Hb_000130_420 Hb_002814_110--Hb_000130_420 Hb_055235_020 Hb_055235_020 Hb_002814_110--Hb_055235_020 Hb_007800_020 Hb_007800_020 Hb_002814_110--Hb_007800_020 Hb_011972_020--Hb_055235_020 Hb_000457_230 Hb_000457_230 Hb_011972_020--Hb_000457_230 Hb_000529_060 Hb_000529_060 Hb_011972_020--Hb_000529_060 Hb_002014_040 Hb_002014_040 Hb_011972_020--Hb_002014_040 Hb_000238_040 Hb_000238_040 Hb_011972_020--Hb_000238_040 Hb_011972_020--Hb_098209_010 Hb_005323_010--Hb_006573_160 Hb_000878_160 Hb_000878_160 Hb_005323_010--Hb_000878_160 Hb_005323_010--Hb_073973_150 Hb_003398_100 Hb_003398_100 Hb_005323_010--Hb_003398_100 Hb_033554_020 Hb_033554_020 Hb_005323_010--Hb_033554_020 Hb_000362_170 Hb_000362_170 Hb_005895_010--Hb_000362_170 Hb_002539_110 Hb_002539_110 Hb_005895_010--Hb_002539_110 Hb_005895_010--Hb_007800_020 Hb_005895_010--Hb_002014_040 Hb_001002_060 Hb_001002_060 Hb_005895_010--Hb_001002_060 Hb_005895_010--Hb_000640_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.47063 6.91461 9.7626 8.34835 7.82465 5.09947
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.50478 2.43561 1.97215 5.32052 8.6336

CAGE analysis