Hb_001153_160

Information

Type -
Description -
Location Contig1153: 104091-106025
Sequence    

Annotation

kegg
ID rcu:RCOM_1683160
description molybdopterin cofactor sulfurase, putative
nr
ID XP_002509693.1
description molybdopterin cofactor sulfurase, putative [Ricinus communis]
swissprot
ID Q9C5X8
description Molybdenum cofactor sulfurase OS=Arabidopsis thaliana GN=ABA3 PE=1 SV=1
trembl
ID B9RC09
description Molybdopterin cofactor sulfurase, putative OS=Ricinus communis GN=RCOM_1683160 PE=4 SV=1
Gene Ontology
ID GO:0003824
description molybdenum cofactor sulfurase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04616: 104482-104652 , PASA_asmbl_04617: 106214-106654
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001153_160 0.0 - - molybdopterin cofactor sulfurase, putative [Ricinus communis]
2 Hb_004213_010 0.0052455288 - - UDP-glucosyltransferase, putative [Ricinus communis]
3 Hb_108576_020 0.0329303498 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003992_130 0.0678654027 - - unnamed protein product [Vitis vinifera]
5 Hb_000035_150 0.0942456106 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 40 [Jatropha curcas]
6 Hb_007313_030 0.0953608757 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Jatropha curcas]
7 Hb_003101_020 0.0958304164 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
8 Hb_001439_050 0.0970725023 - - plastocyanin-like domain-containing family protein [Populus trichocarpa]
9 Hb_062807_010 0.1025699944 - - hypothetical protein JCGZ_15896 [Jatropha curcas]
10 Hb_001958_030 0.1064755233 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
11 Hb_007643_060 0.1085434051 - - -
12 Hb_003626_020 0.1130752571 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Jatropha curcas]
13 Hb_006615_220 0.1145103434 transcription factor TF Family: bHLH PREDICTED: transcription factor BIM1 isoform X2 [Jatropha curcas]
14 Hb_004602_010 0.123323079 - - PREDICTED: uncharacterized protein LOC105042236 isoform X2 [Elaeis guineensis]
15 Hb_002170_060 0.1239985499 - - PREDICTED: mitogen-activated protein kinase-binding protein 1 [Jatropha curcas]
16 Hb_008643_220 0.1240534762 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Jatropha curcas]
17 Hb_002243_030 0.1278566151 - - PREDICTED: 65-kDa microtubule-associated protein 3-like isoform X1 [Jatropha curcas]
18 Hb_000188_070 0.1309331174 - - calcineurin-like phosphoesterase [Manihot esculenta]
19 Hb_001357_160 0.1349265967 - - conserved hypothetical protein [Ricinus communis]
20 Hb_004218_140 0.135376643 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_001153_160 Hb_001153_160 Hb_004213_010 Hb_004213_010 Hb_001153_160--Hb_004213_010 Hb_108576_020 Hb_108576_020 Hb_001153_160--Hb_108576_020 Hb_003992_130 Hb_003992_130 Hb_001153_160--Hb_003992_130 Hb_000035_150 Hb_000035_150 Hb_001153_160--Hb_000035_150 Hb_007313_030 Hb_007313_030 Hb_001153_160--Hb_007313_030 Hb_003101_020 Hb_003101_020 Hb_001153_160--Hb_003101_020 Hb_004213_010--Hb_108576_020 Hb_004213_010--Hb_003992_130 Hb_004213_010--Hb_000035_150 Hb_004213_010--Hb_007313_030 Hb_004213_010--Hb_003101_020 Hb_108576_020--Hb_003101_020 Hb_001439_050 Hb_001439_050 Hb_108576_020--Hb_001439_050 Hb_062807_010 Hb_062807_010 Hb_108576_020--Hb_062807_010 Hb_108576_020--Hb_007313_030 Hb_003992_130--Hb_000035_150 Hb_003626_020 Hb_003626_020 Hb_003992_130--Hb_003626_020 Hb_027337_010 Hb_027337_010 Hb_003992_130--Hb_027337_010 Hb_003992_130--Hb_108576_020 Hb_007643_060 Hb_007643_060 Hb_000035_150--Hb_007643_060 Hb_007951_020 Hb_007951_020 Hb_000035_150--Hb_007951_020 Hb_006615_220 Hb_006615_220 Hb_000035_150--Hb_006615_220 Hb_000035_150--Hb_003626_020 Hb_002518_040 Hb_002518_040 Hb_007313_030--Hb_002518_040 Hb_000086_470 Hb_000086_470 Hb_007313_030--Hb_000086_470 Hb_007313_030--Hb_003101_020 Hb_007313_030--Hb_001439_050 Hb_007313_030--Hb_062807_010 Hb_003101_020--Hb_001439_050 Hb_003101_020--Hb_062807_010 Hb_003101_020--Hb_002518_040 Hb_002066_100 Hb_002066_100 Hb_003101_020--Hb_002066_100 Hb_000722_030 Hb_000722_030 Hb_003101_020--Hb_000722_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.214456 2.51616 0.709539 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.271254 0.738955

CAGE analysis