Hb_001153_230

Information

Type -
Description -
Location Contig1153: 185929-188657
Sequence    

Annotation

kegg
ID pop:POPTR_0003s12110g
description hypothetical protein
nr
ID XP_012087009.1
description PREDICTED: uncharacterized protein LOC105645885 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JNF3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20672 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04635: 188179-188798
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001153_230 0.0 - - PREDICTED: uncharacterized protein LOC105645885 [Jatropha curcas]
2 Hb_074660_010 0.0966737962 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
3 Hb_000527_030 0.1015281825 - - PREDICTED: uncharacterized protein At5g65660 [Jatropha curcas]
4 Hb_007681_020 0.1016794467 - - transferase, putative [Ricinus communis]
5 Hb_028187_010 0.1136522108 - - hypothetical protein JCGZ_23781 [Jatropha curcas]
6 Hb_000816_080 0.1155791969 - - Transcription factor bHLH61 isoform 1 [Theobroma cacao]
7 Hb_052530_010 0.1193754571 - - PREDICTED: uncharacterized protein At3g49140 isoform X2 [Jatropha curcas]
8 Hb_002079_100 0.1198226421 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG5 [Jatropha curcas]
9 Hb_004007_080 0.1208734619 - - PREDICTED: BTB/POZ domain-containing protein At3g49900 [Jatropha curcas]
10 Hb_006519_020 0.1228393965 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
11 Hb_002447_060 0.1228984362 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
12 Hb_000157_060 0.1229487858 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
13 Hb_002453_040 0.1286380327 - - PREDICTED: uncharacterized protein LOC105636487 [Jatropha curcas]
14 Hb_001377_340 0.1288399763 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF023 [Jatropha curcas]
15 Hb_163140_010 0.1325663959 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
16 Hb_103339_010 0.1365157128 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_001040_050 0.1405183297 - - Stem-specific protein TSJT1, putative [Ricinus communis]
18 Hb_000445_320 0.1418772286 - - PREDICTED: wall-associated receptor kinase 2-like isoform X2 [Gossypium raimondii]
19 Hb_028872_130 0.1419419358 - - PREDICTED: uncharacterized protein LOC105644764 isoform X1 [Jatropha curcas]
20 Hb_003767_030 0.1455252779 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]

Gene co-expression network

sample Hb_001153_230 Hb_001153_230 Hb_074660_010 Hb_074660_010 Hb_001153_230--Hb_074660_010 Hb_000527_030 Hb_000527_030 Hb_001153_230--Hb_000527_030 Hb_007681_020 Hb_007681_020 Hb_001153_230--Hb_007681_020 Hb_028187_010 Hb_028187_010 Hb_001153_230--Hb_028187_010 Hb_000816_080 Hb_000816_080 Hb_001153_230--Hb_000816_080 Hb_052530_010 Hb_052530_010 Hb_001153_230--Hb_052530_010 Hb_074660_010--Hb_000527_030 Hb_001564_100 Hb_001564_100 Hb_074660_010--Hb_001564_100 Hb_000157_060 Hb_000157_060 Hb_074660_010--Hb_000157_060 Hb_004007_080 Hb_004007_080 Hb_074660_010--Hb_004007_080 Hb_002837_120 Hb_002837_120 Hb_074660_010--Hb_002837_120 Hb_000527_030--Hb_004007_080 Hb_002453_040 Hb_002453_040 Hb_000527_030--Hb_002453_040 Hb_000527_030--Hb_052530_010 Hb_004241_160 Hb_004241_160 Hb_000527_030--Hb_004241_160 Hb_000083_280 Hb_000083_280 Hb_000527_030--Hb_000083_280 Hb_163140_010 Hb_163140_010 Hb_007681_020--Hb_163140_010 Hb_000051_150 Hb_000051_150 Hb_007681_020--Hb_000051_150 Hb_006519_020 Hb_006519_020 Hb_007681_020--Hb_006519_020 Hb_001377_340 Hb_001377_340 Hb_007681_020--Hb_001377_340 Hb_088118_010 Hb_088118_010 Hb_007681_020--Hb_088118_010 Hb_028187_010--Hb_000157_060 Hb_002447_060 Hb_002447_060 Hb_028187_010--Hb_002447_060 Hb_028187_010--Hb_163140_010 Hb_028187_010--Hb_006519_020 Hb_028187_010--Hb_000527_030 Hb_000816_080--Hb_088118_010 Hb_000816_080--Hb_052530_010 Hb_002079_100 Hb_002079_100 Hb_000816_080--Hb_002079_100 Hb_003226_040 Hb_003226_040 Hb_000816_080--Hb_003226_040 Hb_000816_080--Hb_004007_080 Hb_007558_060 Hb_007558_060 Hb_000816_080--Hb_007558_060 Hb_052530_010--Hb_002453_040 Hb_052530_010--Hb_003226_040 Hb_000445_320 Hb_000445_320 Hb_052530_010--Hb_000445_320 Hb_000193_170 Hb_000193_170 Hb_052530_010--Hb_000193_170 Hb_003464_040 Hb_003464_040 Hb_052530_010--Hb_003464_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.104441 1.83879 0.34176 0 0.028136
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.104892

CAGE analysis