Hb_001157_060

Information

Type -
Description -
Location Contig1157: 52155-59060
Sequence    

Annotation

kegg
ID pop:POPTR_0001s04760g
description POPTRDRAFT_846573; hypothetical protein
nr
ID XP_012093311.1
description PREDICTED: putative nitric oxide synthase [Jatropha curcas]
swissprot
ID P54453
description Uncharacterized protein YqeH OS=Bacillus subtilis (strain 168) GN=yqeH PE=1 SV=1
trembl
ID A0A067LJ77
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19176 PE=4 SV=1
Gene Ontology
ID GO:0005622
description nitric oxide synthase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04705: 52672-58061 , PASA_asmbl_04708: 58827-59032
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001157_060 0.0 - - PREDICTED: putative nitric oxide synthase [Jatropha curcas]
2 Hb_000538_200 0.0673435632 - - PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like [Jatropha curcas]
3 Hb_004600_040 0.0855096621 - - -
4 Hb_003097_150 0.0864499084 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Jatropha curcas]
5 Hb_000803_150 0.0870225105 - - PREDICTED: uncharacterized protein LOC105648311 isoform X2 [Jatropha curcas]
6 Hb_000421_260 0.0875417833 - - PREDICTED: carbamoyl-phosphate synthase large chain, chloroplastic [Jatropha curcas]
7 Hb_000123_260 0.0885865293 - - PREDICTED: protein gar2 [Jatropha curcas]
8 Hb_002007_250 0.0890090191 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002890_340 0.0920145598 - - PREDICTED: uncharacterized protein LOC105631583 isoform X2 [Jatropha curcas]
10 Hb_001214_130 0.0920441478 - - PREDICTED: uncharacterized protein LOC105646578 [Jatropha curcas]
11 Hb_001789_240 0.0926572018 - - hypothetical protein CICLE_v10032221mg [Citrus clementina]
12 Hb_001221_230 0.0947987288 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000057_040 0.0962839899 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_003506_080 0.0976758647 - - dipeptidyl peptidase IV, putative [Ricinus communis]
15 Hb_005237_010 0.0986840216 - - PREDICTED: uncharacterized protein LOC105630921 [Jatropha curcas]
16 Hb_033642_010 0.1003835084 - - PREDICTED: protection of telomeres protein 1a-like isoform X2 [Jatropha curcas]
17 Hb_002039_010 0.1010929424 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
18 Hb_003120_060 0.1019223121 - - PREDICTED: prostaglandin E synthase 2 [Jatropha curcas]
19 Hb_001019_060 0.1022729368 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Jatropha curcas]
20 Hb_000576_030 0.102612024 - - PREDICTED: pentatricopeptide repeat-containing protein At2g20540 [Jatropha curcas]

Gene co-expression network

sample Hb_001157_060 Hb_001157_060 Hb_000538_200 Hb_000538_200 Hb_001157_060--Hb_000538_200 Hb_004600_040 Hb_004600_040 Hb_001157_060--Hb_004600_040 Hb_003097_150 Hb_003097_150 Hb_001157_060--Hb_003097_150 Hb_000803_150 Hb_000803_150 Hb_001157_060--Hb_000803_150 Hb_000421_260 Hb_000421_260 Hb_001157_060--Hb_000421_260 Hb_000123_260 Hb_000123_260 Hb_001157_060--Hb_000123_260 Hb_000538_200--Hb_004600_040 Hb_000815_210 Hb_000815_210 Hb_000538_200--Hb_000815_210 Hb_001736_040 Hb_001736_040 Hb_000538_200--Hb_001736_040 Hb_011673_030 Hb_011673_030 Hb_000538_200--Hb_011673_030 Hb_000538_200--Hb_000421_260 Hb_002876_110 Hb_002876_110 Hb_004600_040--Hb_002876_110 Hb_004600_040--Hb_000123_260 Hb_004600_040--Hb_000421_260 Hb_004600_040--Hb_003097_150 Hb_000317_020 Hb_000317_020 Hb_004600_040--Hb_000317_020 Hb_000300_060 Hb_000300_060 Hb_003097_150--Hb_000300_060 Hb_005237_010 Hb_005237_010 Hb_003097_150--Hb_005237_010 Hb_002609_110 Hb_002609_110 Hb_003097_150--Hb_002609_110 Hb_002149_020 Hb_002149_020 Hb_003097_150--Hb_002149_020 Hb_001571_040 Hb_001571_040 Hb_003097_150--Hb_001571_040 Hb_001214_130 Hb_001214_130 Hb_000803_150--Hb_001214_130 Hb_000162_090 Hb_000162_090 Hb_000803_150--Hb_000162_090 Hb_000749_150 Hb_000749_150 Hb_000803_150--Hb_000749_150 Hb_041091_010 Hb_041091_010 Hb_000803_150--Hb_041091_010 Hb_003642_060 Hb_003642_060 Hb_000803_150--Hb_003642_060 Hb_185467_020 Hb_185467_020 Hb_000803_150--Hb_185467_020 Hb_002890_340 Hb_002890_340 Hb_000421_260--Hb_002890_340 Hb_001720_050 Hb_001720_050 Hb_000421_260--Hb_001720_050 Hb_007951_050 Hb_007951_050 Hb_000421_260--Hb_007951_050 Hb_005062_070 Hb_005062_070 Hb_000421_260--Hb_005062_070 Hb_009111_050 Hb_009111_050 Hb_000421_260--Hb_009111_050 Hb_007426_230 Hb_007426_230 Hb_000123_260--Hb_007426_230 Hb_000189_620 Hb_000189_620 Hb_000123_260--Hb_000189_620 Hb_001545_120 Hb_001545_120 Hb_000123_260--Hb_001545_120 Hb_000123_260--Hb_003097_150 Hb_004195_160 Hb_004195_160 Hb_000123_260--Hb_004195_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.1755 4.34389 2.11652 2.53483 13.854 18.3144
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.76198 12.3062 9.08459 6.09023 5.14608

CAGE analysis