Hb_001159_230

Information

Type -
Description -
Location Contig1159: 207669-217010
Sequence    

Annotation

kegg
ID rcu:RCOM_1681390
description Kinesin heavy chain, putative
nr
ID XP_002509638.1
description Kinesin heavy chain, putative [Ricinus communis]
swissprot
ID Q9FZ06
description Armadillo repeat-containing kinesin-like protein 3 OS=Arabidopsis thaliana GN=ARK3 PE=1 SV=1
trembl
ID B9RBV4
description Kinesin-like protein OS=Ricinus communis GN=RCOM_1681390 PE=3 SV=1
Gene Ontology
ID GO:0005871
description armadillo repeat-containing kinesin-like protein 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04792: 211004-216865
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001159_230 0.0 - - Kinesin heavy chain, putative [Ricinus communis]
2 Hb_000878_050 0.0926344613 - - PREDICTED: fasciclin-like arabinogalactan protein 17 [Jatropha curcas]
3 Hb_006002_050 0.0930688345 - - PREDICTED: uncharacterized protein LOC105638083 [Jatropha curcas]
4 Hb_001095_020 0.0948924981 - - PREDICTED: F-box protein At2g26850-like [Jatropha curcas]
5 Hb_004696_010 0.0964273662 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At4g34500 [Jatropha curcas]
6 Hb_004435_020 0.0991493956 - - PREDICTED: tubulin alpha-2 chain [Jatropha curcas]
7 Hb_005976_110 0.0991702044 - - PREDICTED: uncharacterized protein LOC105639708 [Jatropha curcas]
8 Hb_000417_210 0.1009641169 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_000003_280 0.1014128009 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001541_130 0.1020646884 - - GDSL esterase/lipase [Morus notabilis]
11 Hb_001951_080 0.1061896718 - - O-acetyltransferase, putative [Ricinus communis]
12 Hb_005784_010 0.1070204098 - - PREDICTED: uncharacterized protein LOC105645175 [Jatropha curcas]
13 Hb_002815_020 0.1088944785 transcription factor TF Family: G2-like Homeodomain-like superfamily protein isoform 2 [Theobroma cacao]
14 Hb_001544_090 0.1106650232 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
15 Hb_000345_550 0.1112320183 - - PREDICTED: uncharacterized protein LOC105629456 [Jatropha curcas]
16 Hb_002150_090 0.111569613 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
17 Hb_007811_020 0.111694247 - - PREDICTED: expansin-A6 [Jatropha curcas]
18 Hb_012098_160 0.1126210569 - - PREDICTED: pathogenesis-related protein 5-like [Jatropha curcas]
19 Hb_001032_020 0.1127246718 - - ankyrin repeat protein [Bruguiera gymnorhiza]
20 Hb_000270_380 0.113160808 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 [Jatropha curcas]

Gene co-expression network

sample Hb_001159_230 Hb_001159_230 Hb_000878_050 Hb_000878_050 Hb_001159_230--Hb_000878_050 Hb_006002_050 Hb_006002_050 Hb_001159_230--Hb_006002_050 Hb_001095_020 Hb_001095_020 Hb_001159_230--Hb_001095_020 Hb_004696_010 Hb_004696_010 Hb_001159_230--Hb_004696_010 Hb_004435_020 Hb_004435_020 Hb_001159_230--Hb_004435_020 Hb_005976_110 Hb_005976_110 Hb_001159_230--Hb_005976_110 Hb_000878_050--Hb_004435_020 Hb_005542_120 Hb_005542_120 Hb_000878_050--Hb_005542_120 Hb_000392_110 Hb_000392_110 Hb_000878_050--Hb_000392_110 Hb_000003_280 Hb_000003_280 Hb_000878_050--Hb_000003_280 Hb_004223_060 Hb_004223_060 Hb_000878_050--Hb_004223_060 Hb_007904_280 Hb_007904_280 Hb_000878_050--Hb_007904_280 Hb_000011_280 Hb_000011_280 Hb_006002_050--Hb_000011_280 Hb_000997_080 Hb_000997_080 Hb_006002_050--Hb_000997_080 Hb_006002_050--Hb_000003_280 Hb_002783_280 Hb_002783_280 Hb_006002_050--Hb_002783_280 Hb_000297_140 Hb_000297_140 Hb_006002_050--Hb_000297_140 Hb_001674_010 Hb_001674_010 Hb_001095_020--Hb_001674_010 Hb_002150_090 Hb_002150_090 Hb_001095_020--Hb_002150_090 Hb_000028_190 Hb_000028_190 Hb_001095_020--Hb_000028_190 Hb_001095_020--Hb_004435_020 Hb_007163_100 Hb_007163_100 Hb_001095_020--Hb_007163_100 Hb_001541_130 Hb_001541_130 Hb_001095_020--Hb_001541_130 Hb_011918_070 Hb_011918_070 Hb_004696_010--Hb_011918_070 Hb_003580_050 Hb_003580_050 Hb_004696_010--Hb_003580_050 Hb_028008_040 Hb_028008_040 Hb_004696_010--Hb_028008_040 Hb_003835_080 Hb_003835_080 Hb_004696_010--Hb_003835_080 Hb_004696_010--Hb_001541_130 Hb_004435_020--Hb_005976_110 Hb_010407_130 Hb_010407_130 Hb_004435_020--Hb_010407_130 Hb_000103_450 Hb_000103_450 Hb_004435_020--Hb_000103_450 Hb_007811_020 Hb_007811_020 Hb_004435_020--Hb_007811_020 Hb_001544_090 Hb_001544_090 Hb_005976_110--Hb_001544_090 Hb_005976_110--Hb_001095_020 Hb_005976_110--Hb_000878_050 Hb_000680_170 Hb_000680_170 Hb_005976_110--Hb_000680_170 Hb_000032_420 Hb_000032_420 Hb_005976_110--Hb_000032_420
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0211151 0.345671 2.40551 4.55991 0.0479354 0.051848
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0387032 0.0507621 0.0778188 0.241456 2.73452

CAGE analysis