Hb_001174_040

Information

Type -
Description -
Location Contig1174: 24690-24929
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0044464
description lrr receptor-like serine threonine-protein kinase fls2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001174_040 0.0 - - -
2 Hb_000617_070 0.0573824105 - - hypothetical protein POPTR_0005s02420g [Populus trichocarpa]
3 Hb_002073_160 0.0833515886 - - hypothetical protein JCGZ_21740 [Jatropha curcas]
4 Hb_005841_070 0.0846735605 - - conserved hypothetical protein [Ricinus communis]
5 Hb_105885_010 0.1021269906 - - PREDICTED: uncharacterized protein LOC103441690 [Malus domestica]
6 Hb_000480_020 0.10379551 - - conserved hypothetical protein [Ricinus communis]
7 Hb_009620_080 0.106575393 - - hypothetical protein POPTR_0007s08150g [Populus trichocarpa]
8 Hb_000155_130 0.1082386576 - - conserved hypothetical protein [Ricinus communis]
9 Hb_027472_250 0.1117650198 - - hypothetical protein POPTR_0007s08150g [Populus trichocarpa]
10 Hb_000028_090 0.1124191204 - - PREDICTED: uncharacterized protein LOC105135810 [Populus euphratica]
11 Hb_002757_040 0.1191399008 - - -
12 Hb_004449_100 0.1228974064 - - -
13 Hb_000868_020 0.1248911886 - - -
14 Hb_001141_260 0.1260459754 - - Uncharacterized protein TCM_020647 [Theobroma cacao]
15 Hb_000521_030 0.1270819374 - - PREDICTED: uncharacterized protein LOC105650350 [Jatropha curcas]
16 Hb_009767_040 0.1309735771 - - PREDICTED: uncharacterized protein LOC105127022 [Populus euphratica]
17 Hb_000485_050 0.1310724429 - - PREDICTED: alpha-dioxygenase 1 [Jatropha curcas]
18 Hb_001401_130 0.1345287313 - - Calcium-binding EF-hand family protein, putative [Theobroma cacao]
19 Hb_003528_090 0.1359726307 - - Uncharacterized protein TCM_037169 [Theobroma cacao]
20 Hb_010327_060 0.1360465545 - - hypothetical protein B456_001G246300 [Gossypium raimondii]

Gene co-expression network

sample Hb_001174_040 Hb_001174_040 Hb_000617_070 Hb_000617_070 Hb_001174_040--Hb_000617_070 Hb_002073_160 Hb_002073_160 Hb_001174_040--Hb_002073_160 Hb_005841_070 Hb_005841_070 Hb_001174_040--Hb_005841_070 Hb_105885_010 Hb_105885_010 Hb_001174_040--Hb_105885_010 Hb_000480_020 Hb_000480_020 Hb_001174_040--Hb_000480_020 Hb_009620_080 Hb_009620_080 Hb_001174_040--Hb_009620_080 Hb_009470_010 Hb_009470_010 Hb_000617_070--Hb_009470_010 Hb_001141_260 Hb_001141_260 Hb_000617_070--Hb_001141_260 Hb_027472_250 Hb_027472_250 Hb_000617_070--Hb_027472_250 Hb_000617_070--Hb_009620_080 Hb_001956_170 Hb_001956_170 Hb_000617_070--Hb_001956_170 Hb_002073_160--Hb_105885_010 Hb_001210_120 Hb_001210_120 Hb_002073_160--Hb_001210_120 Hb_002073_160--Hb_000617_070 Hb_133926_010 Hb_133926_010 Hb_002073_160--Hb_133926_010 Hb_188281_020 Hb_188281_020 Hb_002073_160--Hb_188281_020 Hb_005841_070--Hb_000480_020 Hb_000155_130 Hb_000155_130 Hb_005841_070--Hb_000155_130 Hb_005841_070--Hb_009620_080 Hb_002757_040 Hb_002757_040 Hb_005841_070--Hb_002757_040 Hb_000028_090 Hb_000028_090 Hb_005841_070--Hb_000028_090 Hb_105885_010--Hb_188281_020 Hb_105885_010--Hb_001210_120 Hb_002031_020 Hb_002031_020 Hb_105885_010--Hb_002031_020 Hb_025557_080 Hb_025557_080 Hb_105885_010--Hb_025557_080 Hb_000480_020--Hb_000155_130 Hb_092655_010 Hb_092655_010 Hb_000480_020--Hb_092655_010 Hb_009164_010 Hb_009164_010 Hb_000480_020--Hb_009164_010 Hb_000480_020--Hb_002757_040 Hb_000594_010 Hb_000594_010 Hb_000480_020--Hb_000594_010 Hb_009620_080--Hb_027472_250 Hb_009620_080--Hb_000028_090 Hb_000485_050 Hb_000485_050 Hb_009620_080--Hb_000485_050 Hb_009620_080--Hb_002757_040 Hb_010327_060 Hb_010327_060 Hb_009620_080--Hb_010327_060 Hb_003925_010 Hb_003925_010 Hb_009620_080--Hb_003925_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 17.4297 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.26767 2.24913

CAGE analysis