Hb_001179_010

Information

Type -
Description -
Location Contig1179: 1721-7602
Sequence    

Annotation

kegg
ID rcu:RCOM_0115300
description transferase, transferring glycosyl groups, putative (EC:2.4.1.223)
nr
ID XP_012090202.1
description PREDICTED: glycosyltransferase family protein 64 protein C5 [Jatropha curcas]
swissprot
ID Q84WB7
description Glycosyltransferase family protein 64 protein C5 OS=Arabidopsis thaliana GN=At5g04500 PE=2 SV=1
trembl
ID A0A067LL22
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01554 PE=4 SV=1
Gene Ontology
ID GO:0016021
description glycosyltransferase family protein 64 protein c5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05393: 1692-7645 , PASA_asmbl_05394: 5868-6056
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001179_010 0.0 - - PREDICTED: glycosyltransferase family protein 64 protein C5 [Jatropha curcas]
2 Hb_001357_060 0.1056362226 transcription factor TF Family: Orphans PREDICTED: B-box zinc finger protein 18-like [Cicer arietinum]
3 Hb_000329_790 0.1086044589 - - PREDICTED: uncharacterized protein LOC105643367 [Jatropha curcas]
4 Hb_000007_440 0.1150749467 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
5 Hb_007483_080 0.1178196775 - - hypothetical protein RCOM_0634810 [Ricinus communis]
6 Hb_000096_110 0.1197934555 - - PREDICTED: uncharacterized protein LOC105787685 isoform X1 [Gossypium raimondii]
7 Hb_026698_020 0.129828814 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
8 Hb_001195_230 0.1301425505 - - PREDICTED: 3-ketoacyl-CoA synthase 4 [Jatropha curcas]
9 Hb_002838_010 0.1341776926 - - AGPase large subunit protein [Hevea brasiliensis]
10 Hb_031385_010 0.1342543422 - - PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]
11 Hb_000009_150 0.1356907767 - - carbohydrate transporter, putative [Ricinus communis]
12 Hb_005999_020 0.1361088222 transcription factor TF Family: C2H2 PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Jatropha curcas]
13 Hb_002809_120 0.1361987689 - - Uncharacterized protein TCM_031281 [Theobroma cacao]
14 Hb_002010_100 0.1363919895 - - PREDICTED: uncharacterized protein LOC105633355 [Jatropha curcas]
15 Hb_029584_160 0.1380085417 - - PREDICTED: thioredoxin-like 2, chloroplastic [Populus euphratica]
16 Hb_002571_080 0.1381417484 - - secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides]
17 Hb_005080_020 0.139185494 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
18 Hb_002316_020 0.1397415711 - - PREDICTED: uncharacterized protein LOC105640407 [Jatropha curcas]
19 Hb_006970_170 0.1400537546 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
20 Hb_002849_180 0.1402114591 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_001179_010 Hb_001179_010 Hb_001357_060 Hb_001357_060 Hb_001179_010--Hb_001357_060 Hb_000329_790 Hb_000329_790 Hb_001179_010--Hb_000329_790 Hb_000007_440 Hb_000007_440 Hb_001179_010--Hb_000007_440 Hb_007483_080 Hb_007483_080 Hb_001179_010--Hb_007483_080 Hb_000096_110 Hb_000096_110 Hb_001179_010--Hb_000096_110 Hb_026698_020 Hb_026698_020 Hb_001179_010--Hb_026698_020 Hb_002809_120 Hb_002809_120 Hb_001357_060--Hb_002809_120 Hb_002783_140 Hb_002783_140 Hb_001357_060--Hb_002783_140 Hb_003905_040 Hb_003905_040 Hb_001357_060--Hb_003905_040 Hb_000477_110 Hb_000477_110 Hb_001357_060--Hb_000477_110 Hb_001357_060--Hb_000007_440 Hb_005064_070 Hb_005064_070 Hb_000329_790--Hb_005064_070 Hb_048476_040 Hb_048476_040 Hb_000329_790--Hb_048476_040 Hb_132840_020 Hb_132840_020 Hb_000329_790--Hb_132840_020 Hb_009449_100 Hb_009449_100 Hb_000329_790--Hb_009449_100 Hb_000366_050 Hb_000366_050 Hb_000329_790--Hb_000366_050 Hb_000007_440--Hb_007483_080 Hb_002849_180 Hb_002849_180 Hb_000007_440--Hb_002849_180 Hb_002010_100 Hb_002010_100 Hb_000007_440--Hb_002010_100 Hb_006483_090 Hb_006483_090 Hb_000007_440--Hb_006483_090 Hb_001158_120 Hb_001158_120 Hb_000007_440--Hb_001158_120 Hb_006970_170 Hb_006970_170 Hb_000007_440--Hb_006970_170 Hb_007483_080--Hb_002010_100 Hb_002361_010 Hb_002361_010 Hb_007483_080--Hb_002361_010 Hb_007483_080--Hb_002849_180 Hb_007483_080--Hb_001158_120 Hb_000500_230 Hb_000500_230 Hb_007483_080--Hb_000500_230 Hb_001195_230 Hb_001195_230 Hb_000096_110--Hb_001195_230 Hb_000320_450 Hb_000320_450 Hb_000096_110--Hb_000320_450 Hb_002838_010 Hb_002838_010 Hb_000096_110--Hb_002838_010 Hb_002316_020 Hb_002316_020 Hb_000096_110--Hb_002316_020 Hb_000096_110--Hb_000007_440 Hb_001514_240 Hb_001514_240 Hb_026698_020--Hb_001514_240 Hb_000417_410 Hb_000417_410 Hb_026698_020--Hb_000417_410 Hb_026698_020--Hb_009449_100 Hb_002888_040 Hb_002888_040 Hb_026698_020--Hb_002888_040 Hb_026698_020--Hb_001195_230 Hb_132840_030 Hb_132840_030 Hb_026698_020--Hb_132840_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.185609 14.811 16.0132 13.3534 0.303661 0.412856
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.259659 0.444718 1.83784 6.6236 11.5296

CAGE analysis