Hb_001188_070

Information

Type -
Description -
Location Contig1188: 82505-88417
Sequence    

Annotation

kegg
ID pxb:103934309
description protein disulfide isomerase-like 5-1
nr
ID XP_012064862.1
description PREDICTED: protein disulfide-isomerase 5-1 [Jatropha curcas]
swissprot
ID Q8GYD1
description Protein disulfide-isomerase 5-1 OS=Arabidopsis thaliana GN=PDIL5-1 PE=2 SV=1
trembl
ID A0A067L6P2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05564 PE=4 SV=1
Gene Ontology
ID GO:0045454
description protein disulfide-isomerase 5-1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05567: 83800-84196 , PASA_asmbl_05568: 82547-88369 , PASA_asmbl_05569: 83038-88369
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001188_070 0.0 - - PREDICTED: protein disulfide-isomerase 5-1 [Jatropha curcas]
2 Hb_011618_050 0.0770189281 - - PREDICTED: uncharacterized protein LOC105634948 [Jatropha curcas]
3 Hb_001268_240 0.0815581339 - - PREDICTED: uncharacterized protein LOC105630174 isoform X2 [Jatropha curcas]
4 Hb_024847_010 0.0842094925 - - UPF0586 C9orf41-like protein [Medicago truncatula]
5 Hb_001205_250 0.0844977445 - - PREDICTED: uncharacterized protein LOC105643856 [Jatropha curcas]
6 Hb_005144_090 0.084882519 - - PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1-like [Citrus sinensis]
7 Hb_002783_170 0.0854980001 - - PREDICTED: BRCA1-A complex subunit BRE isoform X2 [Jatropha curcas]
8 Hb_027380_060 0.0864776015 - - PREDICTED: putative ALA-interacting subunit 2 [Jatropha curcas]
9 Hb_000787_060 0.0943368649 - - thioredoxin domain-containing protein, putative [Ricinus communis]
10 Hb_009898_050 0.0946629638 - - PREDICTED: beta-taxilin [Jatropha curcas]
11 Hb_001188_060 0.0950640593 - - -
12 Hb_003964_070 0.0957454832 - - hypothetical protein JCGZ_15695 [Jatropha curcas]
13 Hb_000007_390 0.0958762448 - - hypothetical protein JCGZ_18250 [Jatropha curcas]
14 Hb_000035_470 0.0959195317 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
15 Hb_001135_220 0.0962415738 - - FGFR1 oncogene partner, putative [Ricinus communis]
16 Hb_000317_470 0.0976234305 - - PREDICTED: CCR4-NOT transcription complex subunit 11 [Jatropha curcas]
17 Hb_002073_190 0.0982538831 - - PREDICTED: uncharacterized protein LOC105649812 isoform X1 [Jatropha curcas]
18 Hb_000751_030 0.0986363704 - - Vesicle transport protein GOT1B, putative [Ricinus communis]
19 Hb_001357_350 0.0994294845 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001009_320 0.0996578558 - - PREDICTED: uncharacterized protein LOC105640250 [Jatropha curcas]

Gene co-expression network

sample Hb_001188_070 Hb_001188_070 Hb_011618_050 Hb_011618_050 Hb_001188_070--Hb_011618_050 Hb_001268_240 Hb_001268_240 Hb_001188_070--Hb_001268_240 Hb_024847_010 Hb_024847_010 Hb_001188_070--Hb_024847_010 Hb_001205_250 Hb_001205_250 Hb_001188_070--Hb_001205_250 Hb_005144_090 Hb_005144_090 Hb_001188_070--Hb_005144_090 Hb_002783_170 Hb_002783_170 Hb_001188_070--Hb_002783_170 Hb_011618_050--Hb_005144_090 Hb_000046_040 Hb_000046_040 Hb_011618_050--Hb_000046_040 Hb_000649_230 Hb_000649_230 Hb_011618_050--Hb_000649_230 Hb_000751_030 Hb_000751_030 Hb_011618_050--Hb_000751_030 Hb_000049_140 Hb_000049_140 Hb_011618_050--Hb_000049_140 Hb_000245_220 Hb_000245_220 Hb_011618_050--Hb_000245_220 Hb_000417_130 Hb_000417_130 Hb_001268_240--Hb_000417_130 Hb_001357_350 Hb_001357_350 Hb_001268_240--Hb_001357_350 Hb_000640_170 Hb_000640_170 Hb_001268_240--Hb_000640_170 Hb_001318_280 Hb_001318_280 Hb_001268_240--Hb_001318_280 Hb_009898_050 Hb_009898_050 Hb_001268_240--Hb_009898_050 Hb_172632_100 Hb_172632_100 Hb_001268_240--Hb_172632_100 Hb_006120_070 Hb_006120_070 Hb_024847_010--Hb_006120_070 Hb_003964_070 Hb_003964_070 Hb_024847_010--Hb_003964_070 Hb_001142_030 Hb_001142_030 Hb_024847_010--Hb_001142_030 Hb_002918_030 Hb_002918_030 Hb_024847_010--Hb_002918_030 Hb_003665_060 Hb_003665_060 Hb_024847_010--Hb_003665_060 Hb_001584_140 Hb_001584_140 Hb_001205_250--Hb_001584_140 Hb_001188_060 Hb_001188_060 Hb_001205_250--Hb_001188_060 Hb_000637_150 Hb_000637_150 Hb_001205_250--Hb_000637_150 Hb_000915_260 Hb_000915_260 Hb_001205_250--Hb_000915_260 Hb_017700_010 Hb_017700_010 Hb_001205_250--Hb_017700_010 Hb_005144_090--Hb_000049_140 Hb_005144_090--Hb_000417_130 Hb_000297_160 Hb_000297_160 Hb_005144_090--Hb_000297_160 Hb_002013_020 Hb_002013_020 Hb_005144_090--Hb_002013_020 Hb_123915_040 Hb_123915_040 Hb_005144_090--Hb_123915_040 Hb_000414_050 Hb_000414_050 Hb_002783_170--Hb_000414_050 Hb_000776_100 Hb_000776_100 Hb_002783_170--Hb_000776_100 Hb_002836_140 Hb_002836_140 Hb_002783_170--Hb_002836_140 Hb_000915_080 Hb_000915_080 Hb_002783_170--Hb_000915_080 Hb_007951_040 Hb_007951_040 Hb_002783_170--Hb_007951_040 Hb_000101_380 Hb_000101_380 Hb_002783_170--Hb_000101_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.9655 9.16174 32.5099 29.0904 36.1349 27.3885
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.8674 28.1502 16.9147 23.5312 22.7984

CAGE analysis