Hb_001189_150

Information

Type transcription factor
Description TF Family: NAC
Location Contig1189: 124980-125499
Sequence    

Annotation

kegg
ID rcu:RCOM_1340960
description transcription factor, putative
nr
ID XP_012083079.1
description PREDICTED: NAC domain-containing protein 89-like [Jatropha curcas]
swissprot
ID Q9ZVH0
description Protein FEZ OS=Arabidopsis thaliana GN=FEZ PE=2 SV=1
trembl
ID R4N5S4
description NAC transcription factor 071 OS=Jatropha curcas PE=4 SV=1
Gene Ontology
ID GO:0003677
description nac domain-containing protein 45-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001189_150 0.0 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 89-like [Jatropha curcas]
2 Hb_001832_070 0.102438852 - - PREDICTED: uncharacterized protein LOC105637887 [Jatropha curcas]
3 Hb_000521_100 0.1026781532 - - conserved hypothetical protein [Ricinus communis]
4 Hb_012272_010 0.1226401424 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
5 Hb_003633_150 0.1255432773 - - hypothetical protein JCGZ_23296 [Jatropha curcas]
6 Hb_000836_220 0.1259924186 - - UDP-glucosyltransferase, putative [Ricinus communis]
7 Hb_003864_020 0.130288214 - - kinase, putative [Ricinus communis]
8 Hb_005282_010 0.1350362636 - - PREDICTED: probable xyloglucan glycosyltransferase 12 [Populus euphratica]
9 Hb_001195_650 0.1376660871 - - PREDICTED: calcium uniporter protein 4, mitochondrial [Jatropha curcas]
10 Hb_182970_010 0.1471315596 - - calmodulin-binding protein 60-D [Populus trichocarpa]
11 Hb_000028_330 0.1501121505 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
12 Hb_000024_020 0.1502847256 - - PREDICTED: uncharacterized protein LOC105636896 [Jatropha curcas]
13 Hb_000210_160 0.1508517026 - - PREDICTED: protein YLS9-like [Jatropha curcas]
14 Hb_026048_030 0.1536981262 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000186_320 0.1543312737 - - receptor protein kinase, putative [Ricinus communis]
16 Hb_001405_060 0.1544376402 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 4-like [Jatropha curcas]
17 Hb_001247_160 0.1562910929 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
18 Hb_006573_060 0.1563586276 - - hypothetical protein [Bruguiera gymnorhiza]
19 Hb_004324_100 0.1583655962 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
20 Hb_001310_080 0.1587191226 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein AZF2-like [Jatropha curcas]

Gene co-expression network

sample Hb_001189_150 Hb_001189_150 Hb_001832_070 Hb_001832_070 Hb_001189_150--Hb_001832_070 Hb_000521_100 Hb_000521_100 Hb_001189_150--Hb_000521_100 Hb_012272_010 Hb_012272_010 Hb_001189_150--Hb_012272_010 Hb_003633_150 Hb_003633_150 Hb_001189_150--Hb_003633_150 Hb_000836_220 Hb_000836_220 Hb_001189_150--Hb_000836_220 Hb_003864_020 Hb_003864_020 Hb_001189_150--Hb_003864_020 Hb_001832_070--Hb_000836_220 Hb_000186_320 Hb_000186_320 Hb_001832_070--Hb_000186_320 Hb_096930_010 Hb_096930_010 Hb_001832_070--Hb_096930_010 Hb_001198_160 Hb_001198_160 Hb_001832_070--Hb_001198_160 Hb_000028_330 Hb_000028_330 Hb_001832_070--Hb_000028_330 Hb_000116_290 Hb_000116_290 Hb_000521_100--Hb_000116_290 Hb_000521_100--Hb_003633_150 Hb_097634_010 Hb_097634_010 Hb_000521_100--Hb_097634_010 Hb_182970_010 Hb_182970_010 Hb_000521_100--Hb_182970_010 Hb_000210_160 Hb_000210_160 Hb_000521_100--Hb_000210_160 Hb_005048_120 Hb_005048_120 Hb_012272_010--Hb_005048_120 Hb_010721_010 Hb_010721_010 Hb_012272_010--Hb_010721_010 Hb_007904_290 Hb_007904_290 Hb_012272_010--Hb_007904_290 Hb_001019_020 Hb_001019_020 Hb_012272_010--Hb_001019_020 Hb_002936_030 Hb_002936_030 Hb_012272_010--Hb_002936_030 Hb_009476_110 Hb_009476_110 Hb_003633_150--Hb_009476_110 Hb_001247_160 Hb_001247_160 Hb_003633_150--Hb_001247_160 Hb_005282_010 Hb_005282_010 Hb_003633_150--Hb_005282_010 Hb_003633_150--Hb_182970_010 Hb_000567_110 Hb_000567_110 Hb_003633_150--Hb_000567_110 Hb_001405_060 Hb_001405_060 Hb_003633_150--Hb_001405_060 Hb_000836_220--Hb_001198_160 Hb_002370_060 Hb_002370_060 Hb_000836_220--Hb_002370_060 Hb_000054_140 Hb_000054_140 Hb_000836_220--Hb_000054_140 Hb_177215_020 Hb_177215_020 Hb_000836_220--Hb_177215_020 Hb_006573_280 Hb_006573_280 Hb_000836_220--Hb_006573_280 Hb_000836_220--Hb_000028_330 Hb_001897_030 Hb_001897_030 Hb_003864_020--Hb_001897_030 Hb_005389_090 Hb_005389_090 Hb_003864_020--Hb_005389_090 Hb_000991_110 Hb_000991_110 Hb_003864_020--Hb_000991_110 Hb_010142_040 Hb_010142_040 Hb_003864_020--Hb_010142_040 Hb_003864_020--Hb_001832_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.24716 26.3108 11.0186 21.3068 0 0.0679694
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.41676 0.556399 0 3.65509 3.49226

CAGE analysis