Hb_001191_130

Information

Type -
Description -
Location Contig1191: 143190-166591
Sequence    

Annotation

kegg
ID rcu:RCOM_0297470
description Protein ABC1, mitochondrial precursor, putative
nr
ID XP_012089889.1
description PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic [Jatropha curcas]
swissprot
ID Q94BU1
description Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=2 SV=1
trembl
ID B9SMA1
description Protein ABC1, mitochondrial, putative OS=Ricinus communis GN=RCOM_0297470 PE=4 SV=1
Gene Ontology
ID GO:0004672
description uncharacterized aarf domain-containing protein kinase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05653: 143017-166744 , PASA_asmbl_05654: 150376-163638 , PASA_asmbl_05655: 144803-145159 , PASA_asmbl_05656: 145221-145445
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001191_130 0.0 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic [Jatropha curcas]
2 Hb_001153_050 0.1434104656 - - PREDICTED: protein FIZZY-RELATED 2 [Jatropha curcas]
3 Hb_002814_110 0.1502916705 - - PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Jatropha curcas]
4 Hb_002092_110 0.1503922179 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
5 Hb_002311_190 0.1557492935 - - PREDICTED: uncharacterized protein LOC105643493 [Jatropha curcas]
6 Hb_000413_070 0.1564862399 - - conserved hypothetical protein [Ricinus communis]
7 Hb_006573_160 0.1571554239 - - PREDICTED: dnaJ protein ERDJ2A-like [Jatropha curcas]
8 Hb_000270_870 0.1577921034 - - PREDICTED: serine/threonine-protein kinase HT1-like [Jatropha curcas]
9 Hb_000156_160 0.1610660023 - - PREDICTED: urease accessory protein G [Jatropha curcas]
10 Hb_001021_160 0.1626439756 - - PREDICTED: homeobox protein LUMINIDEPENDENS [Jatropha curcas]
11 Hb_000599_080 0.1640744168 - - PREDICTED: TOM1-like protein 1 [Malus domestica]
12 Hb_003872_010 0.1641777692 - - hypothetical protein PRUPE_ppa013215mg [Prunus persica]
13 Hb_041327_020 0.1650660227 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000347_270 0.1669337623 - - PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]
15 Hb_002870_020 0.1671709925 - - PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X1 [Jatropha curcas]
16 Hb_147505_010 0.167636915 - - PREDICTED: uncharacterized protein LOC105633371 [Jatropha curcas]
17 Hb_011918_050 0.1677066032 - - -
18 Hb_005496_050 0.1680044727 - - PREDICTED: QWRF motif-containing protein 2 [Jatropha curcas]
19 Hb_002471_180 0.1685151499 - - receptor protein kinase, putative [Ricinus communis]
20 Hb_001619_050 0.1700305737 - - PREDICTED: uncharacterized protein LOC105630599 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001191_130 Hb_001191_130 Hb_001153_050 Hb_001153_050 Hb_001191_130--Hb_001153_050 Hb_002814_110 Hb_002814_110 Hb_001191_130--Hb_002814_110 Hb_002092_110 Hb_002092_110 Hb_001191_130--Hb_002092_110 Hb_002311_190 Hb_002311_190 Hb_001191_130--Hb_002311_190 Hb_000413_070 Hb_000413_070 Hb_001191_130--Hb_000413_070 Hb_006573_160 Hb_006573_160 Hb_001191_130--Hb_006573_160 Hb_001153_050--Hb_006573_160 Hb_073973_150 Hb_073973_150 Hb_001153_050--Hb_073973_150 Hb_001153_050--Hb_002814_110 Hb_011972_020 Hb_011972_020 Hb_001153_050--Hb_011972_020 Hb_005323_010 Hb_005323_010 Hb_001153_050--Hb_005323_010 Hb_005895_010 Hb_005895_010 Hb_001153_050--Hb_005895_010 Hb_002814_110--Hb_011972_020 Hb_002814_110--Hb_006573_160 Hb_000130_420 Hb_000130_420 Hb_002814_110--Hb_000130_420 Hb_055235_020 Hb_055235_020 Hb_002814_110--Hb_055235_020 Hb_007800_020 Hb_007800_020 Hb_002814_110--Hb_007800_020 Hb_000347_270 Hb_000347_270 Hb_002092_110--Hb_000347_270 Hb_000853_260 Hb_000853_260 Hb_002092_110--Hb_000853_260 Hb_003104_040 Hb_003104_040 Hb_002092_110--Hb_003104_040 Hb_002092_110--Hb_001153_050 Hb_002805_060 Hb_002805_060 Hb_002092_110--Hb_002805_060 Hb_000156_160 Hb_000156_160 Hb_002092_110--Hb_000156_160 Hb_006022_010 Hb_006022_010 Hb_002311_190--Hb_006022_010 Hb_012262_040 Hb_012262_040 Hb_002311_190--Hb_012262_040 Hb_000503_020 Hb_000503_020 Hb_002311_190--Hb_000503_020 Hb_001623_110 Hb_001623_110 Hb_002311_190--Hb_001623_110 Hb_004738_030 Hb_004738_030 Hb_002311_190--Hb_004738_030 Hb_001349_030 Hb_001349_030 Hb_002311_190--Hb_001349_030 Hb_000630_030 Hb_000630_030 Hb_000413_070--Hb_000630_030 Hb_000413_070--Hb_001349_030 Hb_004355_040 Hb_004355_040 Hb_000413_070--Hb_004355_040 Hb_000588_080 Hb_000588_080 Hb_000413_070--Hb_000588_080 Hb_001059_130 Hb_001059_130 Hb_000413_070--Hb_001059_130 Hb_000580_030 Hb_000580_030 Hb_000413_070--Hb_000580_030 Hb_006573_160--Hb_011972_020 Hb_098209_010 Hb_098209_010 Hb_006573_160--Hb_098209_010 Hb_000302_170 Hb_000302_170 Hb_006573_160--Hb_000302_170 Hb_000102_050 Hb_000102_050 Hb_006573_160--Hb_000102_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.89243 4.04643 5.50283 4.96966 3.54039 1.97903
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.32062 0.978916 0.745285 0.999298 4.66568

CAGE analysis