Hb_001195_270

Information

Type -
Description -
Location Contig1195: 148349-153964
Sequence    

Annotation

kegg
ID tcc:TCM_034042
description HAD-superfamily hydrolase isoform 1
nr
ID XP_012071851.1
description PREDICTED: 5'-nucleotidase domain-containing protein 4 isoform X1 [Jatropha curcas]
swissprot
ID Q5RA22
description Cytosolic purine 5'-nucleotidase OS=Pongo abelii GN=NT5C2 PE=2 SV=1
trembl
ID A0A067L1Y8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04430 PE=4 SV=1
Gene Ontology
ID GO:0016787
description 5 -nucleotidase domain-containing protein 4 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05807: 148372-154136 , PASA_asmbl_05808: 148486-151995
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001195_270 0.0 - - PREDICTED: 5'-nucleotidase domain-containing protein 4 isoform X1 [Jatropha curcas]
2 Hb_003752_070 0.0697165281 - - PREDICTED: uncharacterized protein LOC105643912 isoform X1 [Jatropha curcas]
3 Hb_000663_020 0.0723500339 - - PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X1 [Jatropha curcas]
4 Hb_021650_010 0.083553361 - - hypothetical protein JCGZ_09648 [Jatropha curcas]
5 Hb_005731_110 0.0918489079 - - PREDICTED: uncharacterized protein LOC105108367 isoform X1 [Populus euphratica]
6 Hb_005162_110 0.094410586 - - PREDICTED: uncharacterized protein LOC105648430 [Jatropha curcas]
7 Hb_000051_060 0.0953054509 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004586_430 0.0957585888 - - PREDICTED: 29 kDa ribonucleoprotein, chloroplastic [Jatropha curcas]
9 Hb_000703_290 0.1007338773 - - aldo/keto reductase, putative [Ricinus communis]
10 Hb_002218_020 0.102469472 - - PREDICTED: AT-hook motif nuclear-localized protein 14 [Jatropha curcas]
11 Hb_006569_040 0.1027057499 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105650906 [Jatropha curcas]
12 Hb_000640_160 0.1042987235 - - ATP-dependent Clp protease proteolytic subunit, putative [Ricinus communis]
13 Hb_000555_020 0.105339089 - - APO protein 2, chloroplast precursor, putative [Ricinus communis]
14 Hb_001348_190 0.105787848 - - PREDICTED: chlorophyllide a oxygenase, chloroplastic [Jatropha curcas]
15 Hb_102948_010 0.1071978723 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 5 isoform X2 [Jatropha curcas]
16 Hb_001935_100 0.1076605929 - - structural molecule, putative [Ricinus communis]
17 Hb_003225_020 0.1079089398 transcription factor TF Family: HB PREDICTED: homeobox protein HAT3.1 [Jatropha curcas]
18 Hb_178968_140 0.1080209072 - - PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X1 [Jatropha curcas]
19 Hb_001541_050 0.1092937534 - - PREDICTED: serine/threonine-protein kinase AFC2-like [Jatropha curcas]
20 Hb_002107_050 0.1114395621 - - PREDICTED: prostaglandin E synthase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_001195_270 Hb_001195_270 Hb_003752_070 Hb_003752_070 Hb_001195_270--Hb_003752_070 Hb_000663_020 Hb_000663_020 Hb_001195_270--Hb_000663_020 Hb_021650_010 Hb_021650_010 Hb_001195_270--Hb_021650_010 Hb_005731_110 Hb_005731_110 Hb_001195_270--Hb_005731_110 Hb_005162_110 Hb_005162_110 Hb_001195_270--Hb_005162_110 Hb_000051_060 Hb_000051_060 Hb_001195_270--Hb_000051_060 Hb_003752_070--Hb_021650_010 Hb_006787_090 Hb_006787_090 Hb_003752_070--Hb_006787_090 Hb_003752_070--Hb_005162_110 Hb_003752_070--Hb_000051_060 Hb_010174_090 Hb_010174_090 Hb_003752_070--Hb_010174_090 Hb_000663_020--Hb_005731_110 Hb_002218_020 Hb_002218_020 Hb_000663_020--Hb_002218_020 Hb_077026_010 Hb_077026_010 Hb_000663_020--Hb_077026_010 Hb_000663_020--Hb_005162_110 Hb_003506_030 Hb_003506_030 Hb_000663_020--Hb_003506_030 Hb_021650_010--Hb_005162_110 Hb_001232_150 Hb_001232_150 Hb_021650_010--Hb_001232_150 Hb_021650_010--Hb_000051_060 Hb_000802_130 Hb_000802_130 Hb_021650_010--Hb_000802_130 Hb_000640_160 Hb_000640_160 Hb_005731_110--Hb_000640_160 Hb_000959_220 Hb_000959_220 Hb_005731_110--Hb_000959_220 Hb_005731_110--Hb_005162_110 Hb_003225_020 Hb_003225_020 Hb_005731_110--Hb_003225_020 Hb_065755_030 Hb_065755_030 Hb_005731_110--Hb_065755_030 Hb_005946_040 Hb_005946_040 Hb_005162_110--Hb_005946_040 Hb_000003_170 Hb_000003_170 Hb_005162_110--Hb_000003_170 Hb_005162_110--Hb_000051_060 Hb_001935_100 Hb_001935_100 Hb_000051_060--Hb_001935_100 Hb_002876_220 Hb_002876_220 Hb_000051_060--Hb_002876_220 Hb_000051_060--Hb_001232_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.39499 5.3752 15.1706 6.9491 6.31682 6.39528
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.22459 5.42449 2.64569 1.66303 12.9201

CAGE analysis