Hb_001195_390

Information

Type -
Description -
Location Contig1195: 234333-234931
Sequence    

Annotation

kegg
ID rcu:RCOM_1594120
description Glucan endo-1,3-beta-glucosidase precursor, putative (EC:3.2.1.39)
nr
ID XP_011037536.1
description PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Populus euphratica]
swissprot
ID Q94G86
description Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1
trembl
ID A0A067L315
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04419 PE=3 SV=1
Gene Ontology
ID GO:0031225
description glucan endo- -beta-glucosidase 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001195_390 0.0 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Populus euphratica]
2 Hb_002243_040 0.1989946941 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00227 [Jatropha curcas]
3 Hb_013925_010 0.2267748885 - - RecName: Full=Pro-hevein; AltName: Full=Major hevein; Contains: RecName: Full=Hevein; AltName: Allergen=Hev b 6; Contains: RecName: Full=Win-like protein; Flags: Precursor [Hevea brasiliensis]
4 Hb_006344_010 0.229376593 - - -
5 Hb_140572_010 0.2487041385 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Jatropha curcas]
6 Hb_046440_010 0.2509714755 - - hypothetical protein JCGZ_06190 [Jatropha curcas]
7 Hb_000160_200 0.25617444 - - PREDICTED: uncharacterized protein LOC105648226 [Jatropha curcas]
8 Hb_007753_020 0.2653084821 - - -
9 Hb_003752_050 0.2726665797 - - hypothetical protein JCGZ_15078 [Jatropha curcas]
10 Hb_000922_130 0.2751517126 - - hypothetical protein POPTR_0008s04925g [Populus trichocarpa]
11 Hb_130788_010 0.279414511 - - PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
12 Hb_116681_010 0.2850824543 - - hypothetical protein PRUPE_ppa025968mg, partial [Prunus persica]
13 Hb_000939_010 0.285706461 - - PREDICTED: transcription factor bHLH113-like [Jatropha curcas]
14 Hb_010317_030 0.2991750403 - - unknown [Picea sitchensis]
15 Hb_000445_080 0.3021275703 transcription factor TF Family: MIKC PREDICTED: floral homeotic protein PMADS 2 [Jatropha curcas]
16 Hb_063912_010 0.305573763 - - PREDICTED: elongation factor 1-alpha-like, partial [Cucumis sativus]
17 Hb_001021_060 0.3105558893 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_002490_050 0.3165657605 - - Os02g0182500, partial [Oryza sativa Japonica Group]
19 Hb_000415_060 0.31901504 - - PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Jatropha curcas]
20 Hb_000326_030 0.3225706168 - - hypothetical protein PRUPE_ppa013909mg [Prunus persica]

Gene co-expression network

sample Hb_001195_390 Hb_001195_390 Hb_002243_040 Hb_002243_040 Hb_001195_390--Hb_002243_040 Hb_013925_010 Hb_013925_010 Hb_001195_390--Hb_013925_010 Hb_006344_010 Hb_006344_010 Hb_001195_390--Hb_006344_010 Hb_140572_010 Hb_140572_010 Hb_001195_390--Hb_140572_010 Hb_046440_010 Hb_046440_010 Hb_001195_390--Hb_046440_010 Hb_000160_200 Hb_000160_200 Hb_001195_390--Hb_000160_200 Hb_130788_010 Hb_130788_010 Hb_002243_040--Hb_130788_010 Hb_005470_010 Hb_005470_010 Hb_002243_040--Hb_005470_010 Hb_002243_040--Hb_000160_200 Hb_002243_040--Hb_046440_010 Hb_001946_280 Hb_001946_280 Hb_002243_040--Hb_001946_280 Hb_116681_010 Hb_116681_010 Hb_013925_010--Hb_116681_010 Hb_001425_120 Hb_001425_120 Hb_013925_010--Hb_001425_120 Hb_013925_010--Hb_130788_010 Hb_013925_010--Hb_002243_040 Hb_007753_020 Hb_007753_020 Hb_013925_010--Hb_007753_020 Hb_006344_010--Hb_140572_010 Hb_001021_060 Hb_001021_060 Hb_006344_010--Hb_001021_060 Hb_004413_030 Hb_004413_030 Hb_006344_010--Hb_004413_030 Hb_001277_310 Hb_001277_310 Hb_006344_010--Hb_001277_310 Hb_135624_010 Hb_135624_010 Hb_006344_010--Hb_135624_010 Hb_140572_010--Hb_007753_020 Hb_140572_010--Hb_001021_060 Hb_000445_080 Hb_000445_080 Hb_140572_010--Hb_000445_080 Hb_123521_010 Hb_123521_010 Hb_140572_010--Hb_123521_010 Hb_000943_030 Hb_000943_030 Hb_046440_010--Hb_000943_030 Hb_000415_060 Hb_000415_060 Hb_046440_010--Hb_000415_060 Hb_005723_040 Hb_005723_040 Hb_046440_010--Hb_005723_040 Hb_000326_030 Hb_000326_030 Hb_046440_010--Hb_000326_030 Hb_000397_100 Hb_000397_100 Hb_046440_010--Hb_000397_100 Hb_114261_010 Hb_114261_010 Hb_000160_200--Hb_114261_010 Hb_000270_500 Hb_000270_500 Hb_000160_200--Hb_000270_500 Hb_000061_040 Hb_000061_040 Hb_000160_200--Hb_000061_040 Hb_000160_200--Hb_116681_010 Hb_004032_080 Hb_004032_080 Hb_000160_200--Hb_004032_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
33.9761 0.944862 0.371746 0.518198 0.303591 43.1806
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.78584 1.40339 28.2841 9.56636 1.00897

CAGE analysis