Hb_001195_410

Information

Type -
Description -
Location Contig1195: 246287-248290
Sequence    

Annotation

kegg
ID pmum:103320833
description deoxyuridine 5'-triphosphate nucleotidohydrolase
nr
ID XP_012071827.1
description PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Jatropha curcas]
swissprot
ID P32518
description Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Solanum lycopersicum PE=2 SV=1
trembl
ID A0A067KQJ5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04416 PE=4 SV=1
Gene Ontology
ID GO:0016787
description deoxyuridine 5 -triphosphate nucleotidohydrolase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05830: 246999-248023
cDNA
(Sanger)
(ID:Location)		 045_A02.ab1: 247106-248014

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001195_410 0.0 - - PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Jatropha curcas]
2 Hb_118507_010 0.0830109969 - - hypothetical protein VITISV_019292 [Vitis vinifera]
3 Hb_000008_190 0.1083211432 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
4 Hb_004453_070 0.136391616 transcription factor TF Family: CPP PREDICTED: CRC domain-containing protein TSO1-like isoform X1 [Jatropha curcas]
5 Hb_012760_050 0.1413703156 - - RING-H2 finger protein ATL4M, putative [Ricinus communis]
6 Hb_000172_510 0.1439614993 - - hypothetical protein B456_007G243100 [Gossypium raimondii]
7 Hb_000776_060 0.1482983532 - - histone H4 [Zea mays]
8 Hb_019181_030 0.1496806622 - - PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 6-like [Pyrus x bretschneideri]
9 Hb_130613_010 0.1505012826 - - Charged multivesicular body protein 2a, putative [Ricinus communis]
10 Hb_012362_030 0.1538274712 - - PREDICTED: GPI-anchored protein LORELEI-like [Populus euphratica]
11 Hb_005535_080 0.1565168095 - - hypothetical protein CICLE_v10012766mg [Citrus clementina]
12 Hb_000683_100 0.1571183799 - - hypothetical protein JCGZ_22137 [Jatropha curcas]
13 Hb_006569_060 0.1571919102 - - plasma membrane intrinsic protein PIP2;3 [Hevea brasiliensis]
14 Hb_000062_090 0.1590922448 - - PREDICTED: uncharacterized protein LOC105644743 isoform X2 [Jatropha curcas]
15 Hb_001008_200 0.1607655082 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC103961552 [Pyrus x bretschneideri]
16 Hb_030992_010 0.1611414351 - - acetylornithine aminotransferase, putative [Ricinus communis]
17 Hb_010789_020 0.1611484907 - - ubiquitin-conjugating enzyme e2S, putative [Ricinus communis]
18 Hb_000796_020 0.1614409612 - - ADP-ribosylation factor [Phaseolus vulgaris]
19 Hb_005539_310 0.1621142493 - - basic helix-loop-helix-containing protein, putative [Ricinus communis]
20 Hb_002660_110 0.1630975636 - - PREDICTED: serine/threonine-protein kinase-like protein CCR1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001195_410 Hb_001195_410 Hb_118507_010 Hb_118507_010 Hb_001195_410--Hb_118507_010 Hb_000008_190 Hb_000008_190 Hb_001195_410--Hb_000008_190 Hb_004453_070 Hb_004453_070 Hb_001195_410--Hb_004453_070 Hb_012760_050 Hb_012760_050 Hb_001195_410--Hb_012760_050 Hb_000172_510 Hb_000172_510 Hb_001195_410--Hb_000172_510 Hb_000776_060 Hb_000776_060 Hb_001195_410--Hb_000776_060 Hb_118507_010--Hb_000008_190 Hb_005539_310 Hb_005539_310 Hb_118507_010--Hb_005539_310 Hb_004480_020 Hb_004480_020 Hb_118507_010--Hb_004480_020 Hb_005535_080 Hb_005535_080 Hb_118507_010--Hb_005535_080 Hb_001124_110 Hb_001124_110 Hb_118507_010--Hb_001124_110 Hb_002486_050 Hb_002486_050 Hb_000008_190--Hb_002486_050 Hb_004126_040 Hb_004126_040 Hb_000008_190--Hb_004126_040 Hb_002660_110 Hb_002660_110 Hb_000008_190--Hb_002660_110 Hb_001481_150 Hb_001481_150 Hb_000008_190--Hb_001481_150 Hb_000796_020 Hb_000796_020 Hb_004453_070--Hb_000796_020 Hb_006569_060 Hb_006569_060 Hb_004453_070--Hb_006569_060 Hb_004453_070--Hb_000776_060 Hb_012362_030 Hb_012362_030 Hb_004453_070--Hb_012362_030 Hb_000062_090 Hb_000062_090 Hb_004453_070--Hb_000062_090 Hb_013394_050 Hb_013394_050 Hb_012760_050--Hb_013394_050 Hb_019181_030 Hb_019181_030 Hb_012760_050--Hb_019181_030 Hb_048476_060 Hb_048476_060 Hb_012760_050--Hb_048476_060 Hb_012760_050--Hb_000062_090 Hb_002217_500 Hb_002217_500 Hb_012760_050--Hb_002217_500 Hb_002660_150 Hb_002660_150 Hb_000172_510--Hb_002660_150 Hb_001252_090 Hb_001252_090 Hb_000172_510--Hb_001252_090 Hb_000331_370 Hb_000331_370 Hb_000172_510--Hb_000331_370 Hb_000146_040 Hb_000146_040 Hb_000172_510--Hb_000146_040 Hb_000107_080 Hb_000107_080 Hb_000172_510--Hb_000107_080 Hb_000035_200 Hb_000035_200 Hb_000172_510--Hb_000035_200 Hb_000776_060--Hb_000796_020 Hb_000776_060--Hb_000062_090 Hb_030992_010 Hb_030992_010 Hb_000776_060--Hb_030992_010 Hb_000776_060--Hb_012760_050 Hb_006711_090 Hb_006711_090 Hb_000776_060--Hb_006711_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.5479 7.54825 11.7499 37.281 3.48804 6.52516
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.22148 6.9029 5.11455 6.1881 2.83043

CAGE analysis