Hb_001195_470

Information

Type -
Description -
Location Contig1195: 286699-288642
Sequence    

Annotation

kegg
ID rcu:RCOM_1593900
description hypothetical protein
nr
ID XP_012071813.1
description PREDICTED: uncharacterized membrane protein At1g75140 [Jatropha curcas]
swissprot
ID Q9FRK5
description Uncharacterized membrane protein At1g75140 OS=Arabidopsis thaliana GN=At1g75140 PE=1 SV=3
trembl
ID B9R7R8
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1593900 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001195_470 0.0 - - PREDICTED: uncharacterized membrane protein At1g75140 [Jatropha curcas]
2 Hb_000723_220 0.0705426529 - - PREDICTED: uncharacterized protein LOC105642234 [Jatropha curcas]
3 Hb_004019_120 0.0736567134 - - PREDICTED: conserved oligomeric Golgi complex subunit 1 [Jatropha curcas]
4 Hb_000680_110 0.0757848215 - - Endosomal P24A protein precursor, putative [Ricinus communis]
5 Hb_003417_010 0.0827924591 - - PREDICTED: protein TPLATE [Jatropha curcas]
6 Hb_001821_150 0.085101388 - - PREDICTED: potassium transporter 7-like [Jatropha curcas]
7 Hb_004531_120 0.085201635 - - PREDICTED: uncharacterized protein LOC105635025 [Jatropha curcas]
8 Hb_001437_190 0.0856956868 - - ABC transporter family protein [Hevea brasiliensis]
9 Hb_000556_220 0.0857417582 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Jatropha curcas]
10 Hb_000264_350 0.086313693 - - PREDICTED: uncharacterized protein LOC105649541 [Jatropha curcas]
11 Hb_002284_250 0.0866522924 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
12 Hb_004410_050 0.0884005165 - - PREDICTED: uncharacterized TPR repeat-containing protein At1g05150-like [Jatropha curcas]
13 Hb_000062_020 0.0897224159 - - ubiquitin-protein ligase, putative [Ricinus communis]
14 Hb_000099_030 0.090470134 - - 6-phosphogluconate dehydrogenase, putative [Ricinus communis]
15 Hb_006637_020 0.0948856934 - - PREDICTED: uncharacterized protein LOC105642234 [Jatropha curcas]
16 Hb_000183_050 0.0958066148 - - PREDICTED: alpha-mannosidase 2 [Jatropha curcas]
17 Hb_000230_260 0.0992497622 - - PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Jatropha curcas]
18 Hb_001488_220 0.1021591713 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
19 Hb_085781_020 0.1023129035 - - PREDICTED: extra-large guanine nucleotide-binding protein 1 [Jatropha curcas]
20 Hb_000130_180 0.1047021083 - - PREDICTED: GPI inositol-deacylase-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_001195_470 Hb_001195_470 Hb_000723_220 Hb_000723_220 Hb_001195_470--Hb_000723_220 Hb_004019_120 Hb_004019_120 Hb_001195_470--Hb_004019_120 Hb_000680_110 Hb_000680_110 Hb_001195_470--Hb_000680_110 Hb_003417_010 Hb_003417_010 Hb_001195_470--Hb_003417_010 Hb_001821_150 Hb_001821_150 Hb_001195_470--Hb_001821_150 Hb_004531_120 Hb_004531_120 Hb_001195_470--Hb_004531_120 Hb_000230_260 Hb_000230_260 Hb_000723_220--Hb_000230_260 Hb_006637_020 Hb_006637_020 Hb_000723_220--Hb_006637_020 Hb_017358_040 Hb_017358_040 Hb_000723_220--Hb_017358_040 Hb_085781_020 Hb_085781_020 Hb_000723_220--Hb_085781_020 Hb_071130_010 Hb_071130_010 Hb_000723_220--Hb_071130_010 Hb_009296_040 Hb_009296_040 Hb_004019_120--Hb_009296_040 Hb_004019_120--Hb_000230_260 Hb_000556_220 Hb_000556_220 Hb_004019_120--Hb_000556_220 Hb_001377_350 Hb_001377_350 Hb_004019_120--Hb_001377_350 Hb_000140_210 Hb_000140_210 Hb_004019_120--Hb_000140_210 Hb_000680_110--Hb_004531_120 Hb_000680_110--Hb_000723_220 Hb_000264_350 Hb_000264_350 Hb_000680_110--Hb_000264_350 Hb_000680_110--Hb_000230_260 Hb_002902_080 Hb_002902_080 Hb_000680_110--Hb_002902_080 Hb_000183_050 Hb_000183_050 Hb_003417_010--Hb_000183_050 Hb_003417_010--Hb_001821_150 Hb_000284_230 Hb_000284_230 Hb_003417_010--Hb_000284_230 Hb_000066_150 Hb_000066_150 Hb_003417_010--Hb_000066_150 Hb_000494_050 Hb_000494_050 Hb_003417_010--Hb_000494_050 Hb_000161_210 Hb_000161_210 Hb_001821_150--Hb_000161_210 Hb_000130_180 Hb_000130_180 Hb_001821_150--Hb_000130_180 Hb_002284_250 Hb_002284_250 Hb_001821_150--Hb_002284_250 Hb_003038_040 Hb_003038_040 Hb_001821_150--Hb_003038_040 Hb_007982_030 Hb_007982_030 Hb_001821_150--Hb_007982_030 Hb_000139_130 Hb_000139_130 Hb_004531_120--Hb_000139_130 Hb_004109_230 Hb_004109_230 Hb_004531_120--Hb_004109_230 Hb_000062_020 Hb_000062_020 Hb_004531_120--Hb_000062_020 Hb_004531_120--Hb_002284_250 Hb_004531_120--Hb_000130_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.91962 12.5962 4.78742 20.626 11.8275 15.1077
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.17233 3.7386 10.8344 15.3374 15.0534

CAGE analysis