Hb_001195_560

Information

Type -
Description -
Location Contig1195: 360112-366433
Sequence    

Annotation

kegg
ID pop:POPTR_0014s04170g
description phospholipid/glycerol acyltransferase family protein
nr
ID XP_012071791.1
description PREDICTED: lysophospholipid acyltransferase LPEAT1 isoform X1 [Jatropha curcas]
swissprot
ID Q8L7R3
description Lysophospholipid acyltransferase LPEAT1 OS=Arabidopsis thaliana GN=LPEAT1 PE=1 SV=1
trembl
ID A0A067KU10
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04398 PE=4 SV=1
Gene Ontology
ID GO:0005634
description lysophospholipid acyltransferase lpeat1 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05852: 360211-366260 , PASA_asmbl_05853: 360488-366260 , PASA_asmbl_05854: 360488-362622 , PASA_asmbl_05856: 366305-366756
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001195_560 0.0 - - PREDICTED: lysophospholipid acyltransferase LPEAT1 isoform X1 [Jatropha curcas]
2 Hb_007426_150 0.0552026757 - - PREDICTED: F-box protein At5g46170-like [Jatropha curcas]
3 Hb_003018_130 0.0657606245 - - PREDICTED: uncharacterized protein LOC105628777 [Jatropha curcas]
4 Hb_028308_010 0.0662862084 - - PREDICTED: probable protein S-acyltransferase 4 isoform X1 [Jatropha curcas]
5 Hb_000617_100 0.0670436811 - - PREDICTED: uncharacterized protein LOC105647493 [Jatropha curcas]
6 Hb_014361_070 0.0671200027 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
7 Hb_002823_030 0.0688023475 - - -
8 Hb_033642_030 0.0703668695 - - PREDICTED: G-protein coupled receptor 1 isoform X1 [Jatropha curcas]
9 Hb_007576_110 0.0715990034 - - Endoplasmic reticulum vesicle transporter protein [Theobroma cacao]
10 Hb_000789_310 0.0729175698 - - PREDICTED: E3 ubiquitin-protein ligase PRT1 [Jatropha curcas]
11 Hb_002835_230 0.0733318928 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
12 Hb_003680_150 0.0746471323 - - srpk, putative [Ricinus communis]
13 Hb_000085_150 0.0748732597 - - PREDICTED: putative BPI/LBP family protein At1g04970 [Jatropha curcas]
14 Hb_000123_090 0.0757942711 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os03g0620400-like [Jatropha curcas]
15 Hb_001047_220 0.0760884679 - - PREDICTED: F-box protein SKIP17-like [Jatropha curcas]
16 Hb_000933_020 0.0766495774 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000777_050 0.0770114657 - - hypothetical protein CICLE_v10008422mg [Citrus clementina]
18 Hb_001619_150 0.0771165642 - - PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3 isoform X1 [Jatropha curcas]
19 Hb_003371_110 0.0783622689 - - PREDICTED: protein EMSY-LIKE 3 [Jatropha curcas]
20 Hb_002042_140 0.0784124749 - - PREDICTED: uncharacterized protein LOC105647570 [Jatropha curcas]

Gene co-expression network

sample Hb_001195_560 Hb_001195_560 Hb_007426_150 Hb_007426_150 Hb_001195_560--Hb_007426_150 Hb_003018_130 Hb_003018_130 Hb_001195_560--Hb_003018_130 Hb_028308_010 Hb_028308_010 Hb_001195_560--Hb_028308_010 Hb_000617_100 Hb_000617_100 Hb_001195_560--Hb_000617_100 Hb_014361_070 Hb_014361_070 Hb_001195_560--Hb_014361_070 Hb_002823_030 Hb_002823_030 Hb_001195_560--Hb_002823_030 Hb_000933_020 Hb_000933_020 Hb_007426_150--Hb_000933_020 Hb_007426_150--Hb_003018_130 Hb_011618_080 Hb_011618_080 Hb_007426_150--Hb_011618_080 Hb_002273_120 Hb_002273_120 Hb_007426_150--Hb_002273_120 Hb_000429_220 Hb_000429_220 Hb_007426_150--Hb_000429_220 Hb_003018_130--Hb_002823_030 Hb_002749_110 Hb_002749_110 Hb_003018_130--Hb_002749_110 Hb_002835_230 Hb_002835_230 Hb_003018_130--Hb_002835_230 Hb_004785_100 Hb_004785_100 Hb_003018_130--Hb_004785_100 Hb_000574_440 Hb_000574_440 Hb_003018_130--Hb_000574_440 Hb_000777_050 Hb_000777_050 Hb_028308_010--Hb_000777_050 Hb_009296_010 Hb_009296_010 Hb_028308_010--Hb_009296_010 Hb_000333_060 Hb_000333_060 Hb_028308_010--Hb_000333_060 Hb_002398_030 Hb_002398_030 Hb_028308_010--Hb_002398_030 Hb_001619_150 Hb_001619_150 Hb_028308_010--Hb_001619_150 Hb_007576_110 Hb_007576_110 Hb_000617_100--Hb_007576_110 Hb_003549_150 Hb_003549_150 Hb_000617_100--Hb_003549_150 Hb_000617_100--Hb_014361_070 Hb_000683_070 Hb_000683_070 Hb_000617_100--Hb_000683_070 Hb_001051_080 Hb_001051_080 Hb_000617_100--Hb_001051_080 Hb_000975_040 Hb_000975_040 Hb_014361_070--Hb_000975_040 Hb_003371_110 Hb_003371_110 Hb_014361_070--Hb_003371_110 Hb_014361_070--Hb_007576_110 Hb_000289_040 Hb_000289_040 Hb_014361_070--Hb_000289_040 Hb_014361_070--Hb_002823_030 Hb_001195_320 Hb_001195_320 Hb_014361_070--Hb_001195_320 Hb_003680_150 Hb_003680_150 Hb_002823_030--Hb_003680_150 Hb_000190_120 Hb_000190_120 Hb_002823_030--Hb_000190_120 Hb_002823_030--Hb_003371_110 Hb_002823_030--Hb_002835_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.4875 18.4652 15.0837 20.5096 30.2167 26.2172
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.388 11.9291 13.2942 13.4118 14.4989

CAGE analysis