Hb_001195_600

Information

Type transcription factor
Description TF Family: BES1
Location Contig1195: 393447-395721
Sequence    

Annotation

kegg
ID rcu:RCOM_1593760
description BRASSINAZOLE-RESISTANT 1 protein, putative
nr
ID XP_002510347.1
description BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
swissprot
ID Q8S307
description Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis thaliana GN=BZR1 PE=1 SV=1
trembl
ID B9R7Q4
description BRASSINAZOLE-RESISTANT 1 protein, putative OS=Ricinus communis GN=RCOM_1593760 PE=4 SV=1
Gene Ontology
ID GO:0005634
description protein brassinazole-resistant 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05863: 395288-395660
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001195_600 0.0 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
2 Hb_055488_010 0.0696836141 - - PREDICTED: translocase of chloroplast 90, chloroplastic [Jatropha curcas]
3 Hb_029866_090 0.0836790487 - - PREDICTED: uncharacterized protein LOC105648377 [Jatropha curcas]
4 Hb_008725_260 0.0864289281 - - PREDICTED: uncharacterized protein LOC105642597 [Jatropha curcas]
5 Hb_000056_210 0.0923295895 - - PREDICTED: pentatricopeptide repeat-containing protein At1g26900, mitochondrial [Jatropha curcas]
6 Hb_000915_090 0.0928415336 - - PREDICTED: transcription initiation factor TFIID subunit 14b [Jatropha curcas]
7 Hb_002813_040 0.0941596923 - - PREDICTED: PRA1 family protein G2 [Jatropha curcas]
8 Hb_007532_030 0.0944328548 - - PREDICTED: F-box/kelch-repeat protein At1g30090 [Jatropha curcas]
9 Hb_000512_060 0.0970601756 - - PREDICTED: F-box/WD-40 repeat-containing protein At5g21040 [Jatropha curcas]
10 Hb_000210_230 0.0978699045 - - PREDICTED: uncharacterized protein LOC105635819 [Jatropha curcas]
11 Hb_002046_180 0.1017686849 - - PREDICTED: uncharacterized protein LOC105641295 [Jatropha curcas]
12 Hb_004586_340 0.1022963468 - - PREDICTED: serine/threonine-protein kinase PEPKR2 [Jatropha curcas]
13 Hb_009178_030 0.1023330823 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001766_060 0.1030636914 - - conserved hypothetical protein [Ricinus communis]
15 Hb_020956_020 0.1035044956 - - PREDICTED: SNF1-related protein kinase regulatory subunit beta-3-like [Jatropha curcas]
16 Hb_007426_180 0.1037938644 - - PREDICTED: probable inositol transporter 2 [Jatropha curcas]
17 Hb_000876_070 0.1044146308 - - protein phosphatase 2a, regulatory subunit, putative [Ricinus communis]
18 Hb_000696_150 0.1048433904 - - PREDICTED: pentatricopeptide repeat-containing protein At3g51320 [Jatropha curcas]
19 Hb_000866_220 0.1060086416 - - PREDICTED: uncharacterized protein LOC105642989 [Jatropha curcas]
20 Hb_001246_110 0.1066703752 - - PREDICTED: probable purine permease 11 [Jatropha curcas]

Gene co-expression network

sample Hb_001195_600 Hb_001195_600 Hb_055488_010 Hb_055488_010 Hb_001195_600--Hb_055488_010 Hb_029866_090 Hb_029866_090 Hb_001195_600--Hb_029866_090 Hb_008725_260 Hb_008725_260 Hb_001195_600--Hb_008725_260 Hb_000056_210 Hb_000056_210 Hb_001195_600--Hb_000056_210 Hb_000915_090 Hb_000915_090 Hb_001195_600--Hb_000915_090 Hb_002813_040 Hb_002813_040 Hb_001195_600--Hb_002813_040 Hb_000512_060 Hb_000512_060 Hb_055488_010--Hb_000512_060 Hb_001100_060 Hb_001100_060 Hb_055488_010--Hb_001100_060 Hb_004678_040 Hb_004678_040 Hb_055488_010--Hb_004678_040 Hb_000671_050 Hb_000671_050 Hb_055488_010--Hb_000671_050 Hb_000416_040 Hb_000416_040 Hb_055488_010--Hb_000416_040 Hb_000876_070 Hb_000876_070 Hb_029866_090--Hb_000876_070 Hb_020956_020 Hb_020956_020 Hb_029866_090--Hb_020956_020 Hb_001552_020 Hb_001552_020 Hb_029866_090--Hb_001552_020 Hb_003057_100 Hb_003057_100 Hb_029866_090--Hb_003057_100 Hb_002739_100 Hb_002739_100 Hb_029866_090--Hb_002739_100 Hb_005539_350 Hb_005539_350 Hb_029866_090--Hb_005539_350 Hb_002110_150 Hb_002110_150 Hb_008725_260--Hb_002110_150 Hb_002046_180 Hb_002046_180 Hb_008725_260--Hb_002046_180 Hb_000866_220 Hb_000866_220 Hb_008725_260--Hb_000866_220 Hb_009178_030 Hb_009178_030 Hb_008725_260--Hb_009178_030 Hb_008725_260--Hb_000876_070 Hb_007532_030 Hb_007532_030 Hb_008725_260--Hb_007532_030 Hb_000696_150 Hb_000696_150 Hb_000056_210--Hb_000696_150 Hb_000904_070 Hb_000904_070 Hb_000056_210--Hb_000904_070 Hb_000342_060 Hb_000342_060 Hb_000056_210--Hb_000342_060 Hb_000056_210--Hb_000866_220 Hb_004374_070 Hb_004374_070 Hb_000056_210--Hb_004374_070 Hb_004635_100 Hb_004635_100 Hb_000915_090--Hb_004635_100 Hb_002163_020 Hb_002163_020 Hb_000915_090--Hb_002163_020 Hb_000915_090--Hb_008725_260 Hb_010422_060 Hb_010422_060 Hb_000915_090--Hb_010422_060 Hb_000240_090 Hb_000240_090 Hb_000915_090--Hb_000240_090 Hb_004109_170 Hb_004109_170 Hb_000915_090--Hb_004109_170 Hb_001488_070 Hb_001488_070 Hb_002813_040--Hb_001488_070 Hb_003581_070 Hb_003581_070 Hb_002813_040--Hb_003581_070 Hb_002813_040--Hb_029866_090 Hb_031527_040 Hb_031527_040 Hb_002813_040--Hb_031527_040 Hb_002256_030 Hb_002256_030 Hb_002813_040--Hb_002256_030 Hb_002813_040--Hb_020956_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
44.7187 49.3242 25.0971 32.0366 24.9137 52.5498
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
55.3742 70.7222 68.0046 14.2293 28.3336

CAGE analysis